RNA–Protein interactions for RNA: ENST00000439090.6

SAMD3-204, Transcript of sterile alpha motif domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SAMD3, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-204ENST00000439090 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
SAMD3-204ENST00000439090 AEBP2Q6ZN18 517 aaPredicted RBP16.27■□□□□ 0.2
SAMD3-204ENST00000439090 SLC24A1O60721 1099 aa16.18■□□□□ 0.18
SAMD3-204ENST00000439090 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
SAMD3-204ENST00000439090 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
SAMD3-204ENST00000439090 PLPPR3Q6T4P5 718 aa14.94□□□□□ -0.02
SAMD3-204ENST00000439090 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
SAMD3-204ENST00000439090 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
SAMD3-204ENST00000439090 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
SAMD3-204ENST00000439090 KCNA4P22459 653 aa14.47□□□□□ -0.09
SAMD3-204ENST00000439090 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
SAMD3-204ENST00000439090 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
SAMD3-204ENST00000439090 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
SAMD3-204ENST00000439090 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
SAMD3-204ENST00000439090 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
SAMD3-204ENST00000439090 ARXQ96QS3 562 aa13.76□□□□□ -0.21
SAMD3-204ENST00000439090 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
SAMD3-204ENST00000439090 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
SAMD3-204ENST00000439090 BCANQ96GW7 911 aa13.55□□□□□ -0.24
SAMD3-204ENST00000439090 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
SAMD3-204ENST00000439090 APLP2Q06481 763 aa13.51□□□□□ -0.25
SAMD3-204ENST00000439090 ADRA2BP18089 450 aa13.48□□□□□ -0.25
SAMD3-204ENST00000439090 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
SAMD3-204ENST00000439090 TTBK1Q5TCY1 1321 aaPredicted RBP13.42□□□□□ -0.26
SAMD3-204ENST00000439090 PLCB2Q00722 1185 aa13.4□□□□□ -0.27
SAMD3-204ENST00000439090 ZBTB22O15209 634 aa13.38□□□□□ -0.27
SAMD3-204ENST00000439090 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
SAMD3-204ENST00000439090 HOMEZQ8IX15 550 aa13.34□□□□□ -0.27
SAMD3-204ENST00000439090 RANGAP1P46060 587 aaPredicted RBP13.28□□□□□ -0.28
SAMD3-204ENST00000439090 ERICH6Q7L0X2 663 aa13.27□□□□□ -0.29
SAMD3-204ENST00000439090 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
SAMD3-204ENST00000439090 NISCHQ9Y2I1 1504 aa13.22□□□□□ -0.29
SAMD3-204ENST00000439090 MYT1Q01538 1121 aa13.22□□□□□ -0.29
SAMD3-204ENST00000439090 GTF3C3Q9Y5Q9 886 aa13.14□□□□□ -0.31
SAMD3-204ENST00000439090 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
SAMD3-204ENST00000439090 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
SAMD3-204ENST00000439090 FOXD1Q16676 465 aa13.03□□□□□ -0.32
SAMD3-204ENST00000439090 FKBP8Q14318 412 aa13.03□□□□□ -0.32
SAMD3-204ENST00000439090 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
SAMD3-204ENST00000439090 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
SAMD3-204ENST00000439090 TMEM132AQ24JP5 1023 aa12.85□□□□□ -0.35
SAMD3-204ENST00000439090 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
SAMD3-204ENST00000439090 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
SAMD3-204ENST00000439090 C14orf37Q86TY3 774 aa12.76□□□□□ -0.37
SAMD3-204ENST00000439090 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
SAMD3-204ENST00000439090 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
SAMD3-204ENST00000439090 EIF5BO60841 1220 aaKnown RBP12.69□□□□□ -0.38
SAMD3-204ENST00000439090 FBLN2P98095 1184 aa12.69□□□□□ -0.38
SAMD3-204ENST00000439090 FOXD4L1Q9NU39 408 aa12.66□□□□□ -0.38
SAMD3-204ENST00000439090 DCAF8L2P0C7V8 631 aa12.61□□□□□ -0.39
SAMD3-204ENST00000439090 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.4
SAMD3-204ENST00000439090 SUPT5HO00267 1087 aaKnown RBP12.52□□□□□ -0.41
SAMD3-204ENST00000439090 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
SAMD3-204ENST00000439090 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
SAMD3-204ENST00000439090 MSH5O43196 834 aa12.42□□□□□ -0.42
SAMD3-204ENST00000439090 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
SAMD3-204ENST00000439090 HRCP23327 699 aa12.36□□□□□ -0.43
SAMD3-204ENST00000439090 NBR1Q14596 966 aa12.29□□□□□ -0.44
SAMD3-204ENST00000439090 PAXIP1Q6ZW49 1069 aaPredicted RBP12.28□□□□□ -0.44
SAMD3-204ENST00000439090 PLEKHG5O94827 1062 aa12.27□□□□□ -0.45
SAMD3-204ENST00000439090 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
SAMD3-204ENST00000439090 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
SAMD3-204ENST00000439090 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
SAMD3-204ENST00000439090 ABCC9O60706 1549 aa12.21□□□□□ -0.45
SAMD3-204ENST00000439090 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
SAMD3-204ENST00000439090 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
SAMD3-204ENST00000439090 BBXQ8WY36 941 aaPredicted RBP12.15□□□□□ -0.46
SAMD3-204ENST00000439090 CCDC180Q9P1Z9 1646 aa12.12□□□□□ -0.47
SAMD3-204ENST00000439090 PKD2Q13563 968 aa12.11□□□□□ -0.47
SAMD3-204ENST00000439090 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
SAMD3-204ENST00000439090 CNKSR2Q8WXI2 1034 aa11.96□□□□□ -0.49
SAMD3-204ENST00000439090 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
SAMD3-204ENST00000439090 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
SAMD3-204ENST00000439090 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
SAMD3-204ENST00000439090 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
SAMD3-204ENST00000439090 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.51
SAMD3-204ENST00000439090 DNAJC5BQ9UF47 199 aa11.88□□□□□ -0.51
SAMD3-204ENST00000439090 IGSF3O75054 1194 aa11.88□□□□□ -0.51
SAMD3-204ENST00000439090 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
SAMD3-204ENST00000439090 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
SAMD3-204ENST00000439090 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
SAMD3-204ENST00000439090 CDK11BP21127 795 aaKnown RBP11.82□□□□□ -0.52
SAMD3-204ENST00000439090 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
SAMD3-204ENST00000439090 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
SAMD3-204ENST00000439090 ARID3AQ99856 593 aa11.82□□□□□ -0.52
SAMD3-204ENST00000439090 SHROOM4Q9ULL8 1493 aa11.8□□□□□ -0.52
SAMD3-204ENST00000439090 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.52
SAMD3-204ENST00000439090 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
SAMD3-204ENST00000439090 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
SAMD3-204ENST00000439090 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
SAMD3-204ENST00000439090 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
SAMD3-204ENST00000439090 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
SAMD3-204ENST00000439090 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
SAMD3-204ENST00000439090 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
SAMD3-204ENST00000439090 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
SAMD3-204ENST00000439090 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
SAMD3-204ENST00000439090 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
SAMD3-204ENST00000439090 HMGB1P09429 215 aaKnown RBP11.63□□□□□ -0.55
SAMD3-204ENST00000439090 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
SAMD3-204ENST00000439090 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms