RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
RAPGEF3-219ENST00000549151 SHROOM4Q9ULL8 1493 aa21.05■□□□□ 0.96
RAPGEF3-219ENST00000549151 SUPT5HO00267 1087 aaKnown RBP20.73■□□□□ 0.91
RAPGEF3-219ENST00000549151 DCAF8L2P0C7V8 631 aa20.46■□□□□ 0.87
RAPGEF3-219ENST00000549151 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-219ENST00000549151 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
RAPGEF3-219ENST00000549151 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
RAPGEF3-219ENST00000549151 MYO15BQ96JP2 1530 aa19.93■□□□□ 0.78
RAPGEF3-219ENST00000549151 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
RAPGEF3-219ENST00000549151 HRCP23327 699 aa19.64■□□□□ 0.74
RAPGEF3-219ENST00000549151 LOC105371045A0A1W2PR82 267 aa19.6■□□□□ 0.73
RAPGEF3-219ENST00000549151 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-219ENST00000549151 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
RAPGEF3-219ENST00000549151 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
RAPGEF3-219ENST00000549151 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF3-219ENST00000549151 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
RAPGEF3-219ENST00000549151 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
RAPGEF3-219ENST00000549151 ABCC9O60706 1549 aa19.13■□□□□ 0.65
RAPGEF3-219ENST00000549151 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
RAPGEF3-219ENST00000549151 RSF1Q96T23 1441 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF3-219ENST00000549151 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
RAPGEF3-219ENST00000549151 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
RAPGEF3-219ENST00000549151 MROH2BQ7Z745 1585 aa18.74■□□□□ 0.59
RAPGEF3-219ENST00000549151 ZEB1P37275 1124 aaPredicted RBP18.7■□□□□ 0.58
RAPGEF3-219ENST00000549151 WIZO95785 1651 aa18.65■□□□□ 0.58
RAPGEF3-219ENST00000549151 NACADO15069 1562 aa18.65■□□□□ 0.58
RAPGEF3-219ENST00000549151 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF3-219ENST00000549151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
RAPGEF3-219ENST00000549151 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
RAPGEF3-219ENST00000549151 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
RAPGEF3-219ENST00000549151 ABCC8Q09428 1581 aa18.39■□□□□ 0.53
RAPGEF3-219ENST00000549151 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
RAPGEF3-219ENST00000549151 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
RAPGEF3-219ENST00000549151 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
RAPGEF3-219ENST00000549151 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
RAPGEF3-219ENST00000549151 SOGA1O94964 1423 aa18.26■□□□□ 0.51
RAPGEF3-219ENST00000549151 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
RAPGEF3-219ENST00000549151 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
RAPGEF3-219ENST00000549151 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
RAPGEF3-219ENST00000549151 CEP162Q5TB80 1403 aa18.21■□□□□ 0.51
RAPGEF3-219ENST00000549151 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
RAPGEF3-219ENST00000549151 SMARCA2P51531 1590 aa18.18■□□□□ 0.5
RAPGEF3-219ENST00000549151 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
RAPGEF3-219ENST00000549151 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
RAPGEF3-219ENST00000549151 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
RAPGEF3-219ENST00000549151 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.49
RAPGEF3-219ENST00000549151 UNC13AQ9UPW8 1703 aa18.07■□□□□ 0.48
RAPGEF3-219ENST00000549151 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-219ENST00000549151 NEUROD1Q13562 356 aa18.05■□□□□ 0.48
RAPGEF3-219ENST00000549151 WRNQ14191 1432 aaPredicted RBP eCLIP18.04■□□□□ 0.48
RAPGEF3-219ENST00000549151 ACIN1Q9UKV3 1341 aaKnown RBP18.01■□□□□ 0.47
RAPGEF3-219ENST00000549151 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
RAPGEF3-219ENST00000549151 EEA1Q15075 1411 aa17.96■□□□□ 0.47
RAPGEF3-219ENST00000549151 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
RAPGEF3-219ENST00000549151 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
RAPGEF3-219ENST00000549151 APLP2Q06481 763 aa17.92■□□□□ 0.46
RAPGEF3-219ENST00000549151 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
RAPGEF3-219ENST00000549151 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
RAPGEF3-219ENST00000549151 ZNF316A6NFI3 1004 aaPredicted RBP17.88■□□□□ 0.45
RAPGEF3-219ENST00000549151 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
RAPGEF3-219ENST00000549151 CLIP1P30622 1438 aa17.86■□□□□ 0.45
RAPGEF3-219ENST00000549151 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
RAPGEF3-219ENST00000549151 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.44
RAPGEF3-219ENST00000549151 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
RAPGEF3-219ENST00000549151 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.43
RAPGEF3-219ENST00000549151 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.43
RAPGEF3-219ENST00000549151 MIER1Q8N108 512 aa17.73■□□□□ 0.43
RAPGEF3-219ENST00000549151 VPS8Q8N3P4 1428 aa17.72■□□□□ 0.43
RAPGEF3-219ENST00000549151 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
RAPGEF3-219ENST00000549151 KIF21BO75037 1637 aa17.68■□□□□ 0.42
RAPGEF3-219ENST00000549151 ITGAEP38570 1179 aa17.61■□□□□ 0.41
RAPGEF3-219ENST00000549151 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
RAPGEF3-219ENST00000549151 TOP2BQ02880 1626 aa17.52■□□□□ 0.39
RAPGEF3-219ENST00000549151 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
RAPGEF3-219ENST00000549151 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
RAPGEF3-219ENST00000549151 PRXQ9BXM0 1461 aa17.43■□□□□ 0.38
RAPGEF3-219ENST00000549151 KIF27Q86VH2 1401 aa17.42■□□□□ 0.38
RAPGEF3-219ENST00000549151 CUX1P39880 1505 aa17.4■□□□□ 0.38
RAPGEF3-219ENST00000549151 ATP1B4Q9UN42 357 aaPredicted RBP17.4■□□□□ 0.38
RAPGEF3-219ENST00000549151 BIVM-ERCC5R4GMW8 1640 aa17.38■□□□□ 0.37
RAPGEF3-219ENST00000549151 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
RAPGEF3-219ENST00000549151 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
RAPGEF3-219ENST00000549151 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
RAPGEF3-219ENST00000549151 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
RAPGEF3-219ENST00000549151 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
RAPGEF3-219ENST00000549151 ARHGAP35Q9NRY4 1499 aa17.3■□□□□ 0.36
RAPGEF3-219ENST00000549151 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
RAPGEF3-219ENST00000549151 CUX2O14529 1486 aa17.29■□□□□ 0.36
RAPGEF3-219ENST00000549151 RRBP1Q9P2E9 1410 aaKnown RBP17.26■□□□□ 0.35
RAPGEF3-219ENST00000549151 CFTRP13569 1480 aa17.25■□□□□ 0.35
RAPGEF3-219ENST00000549151 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
RAPGEF3-219ENST00000549151 RAB3GAP2Q9H2M9 1393 aa17.22■□□□□ 0.35
RAPGEF3-219ENST00000549151 IGF1RP08069 1367 aa17.22■□□□□ 0.35
RAPGEF3-219ENST00000549151 KCNH8Q96L42 1107 aa17.2■□□□□ 0.34
RAPGEF3-219ENST00000549151 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
RAPGEF3-219ENST00000549151 CARMIL1Q5VZK9 1371 aa17.19■□□□□ 0.34
RAPGEF3-219ENST00000549151 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
RAPGEF3-219ENST00000549151 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
RAPGEF3-219ENST00000549151 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
RAPGEF3-219ENST00000549151 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms