RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 NISCHQ9Y2I1 1504 aa18.27■□□□□ 0.51
DMD-209ENST00000378702 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
DMD-209ENST00000378702 HRCP23327 699 aa17.64■□□□□ 0.41
DMD-209ENST00000378702 MYT1Q01538 1121 aa17.26■□□□□ 0.35
DMD-209ENST00000378702 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
DMD-209ENST00000378702 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
DMD-209ENST00000378702 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
DMD-209ENST00000378702 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
DMD-209ENST00000378702 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
DMD-209ENST00000378702 CCDC180Q9P1Z9 1646 aa16.49■□□□□ 0.23
DMD-209ENST00000378702 CHIC1Q5VXU3 224 aa16.45■□□□□ 0.22
DMD-209ENST00000378702 ZEB1P37275 1124 aaPredicted RBP16.45■□□□□ 0.22
DMD-209ENST00000378702 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
DMD-209ENST00000378702 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
DMD-209ENST00000378702 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
DMD-209ENST00000378702 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
DMD-209ENST00000378702 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
DMD-209ENST00000378702 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
DMD-209ENST00000378702 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
DMD-209ENST00000378702 CENPBP07199 599 aaPredicted RBP16.09■□□□□ 0.17
DMD-209ENST00000378702 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
DMD-209ENST00000378702 BCL11AQ9H165 835 aa15.95■□□□□ 0.14
DMD-209ENST00000378702 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
DMD-209ENST00000378702 FAM9AQ8IZU1 332 aaPredicted RBP15.8■□□□□ 0.12
DMD-209ENST00000378702 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
DMD-209ENST00000378702 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
DMD-209ENST00000378702 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
DMD-209ENST00000378702 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
DMD-209ENST00000378702 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
DMD-209ENST00000378702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
DMD-209ENST00000378702 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
DMD-209ENST00000378702 YTHDC1Q96MU7 727 aaKnown RBP15.47■□□□□ 0.07
DMD-209ENST00000378702 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
DMD-209ENST00000378702 ZNF316A6NFI3 1004 aaPredicted RBP15.42■□□□□ 0.06
DMD-209ENST00000378702 TSHZ2Q9NRE2 1034 aa15.41■□□□□ 0.06
DMD-209ENST00000378702 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
DMD-209ENST00000378702 SUPT16HQ9Y5B9 1047 aaKnown RBP15.35■□□□□ 0.05
DMD-209ENST00000378702 MIER1Q8N108 512 aa15.33■□□□□ 0.05
DMD-209ENST00000378702 APLP2Q06481 763 aa15.24■□□□□ 0.03
DMD-209ENST00000378702 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
DMD-209ENST00000378702 RBM19Q9Y4C8 960 aaKnown RBP14.99□□□□□ -0.01
DMD-209ENST00000378702 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
DMD-209ENST00000378702 ABCC9O60706 1549 aa14.98□□□□□ -0.01
DMD-209ENST00000378702 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
DMD-209ENST00000378702 MSH5O43196 834 aa14.91□□□□□ -0.02
DMD-209ENST00000378702 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
DMD-209ENST00000378702 ANO8Q9HCE9 1232 aaPredicted RBP14.86□□□□□ -0.03
DMD-209ENST00000378702 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
DMD-209ENST00000378702 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
DMD-209ENST00000378702 BCANQ96GW7 911 aa14.83□□□□□ -0.04
DMD-209ENST00000378702 FANCIQ9NVI1 1328 aa14.82□□□□□ -0.04
DMD-209ENST00000378702 FKBP8Q14318 412 aa14.79□□□□□ -0.04
DMD-209ENST00000378702 DEKP35659 375 aaKnown RBP14.77□□□□□ -0.04
DMD-209ENST00000378702 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
DMD-209ENST00000378702 CEP162Q5TB80 1403 aa14.74□□□□□ -0.05
DMD-209ENST00000378702 UBE2Q2Q8WVN8 375 aa14.7□□□□□ -0.06
DMD-209ENST00000378702 SALL2Q9Y467 1007 aaPredicted RBP14.67□□□□□ -0.06
DMD-209ENST00000378702 NEFLP07196 543 aa14.67□□□□□ -0.06
DMD-209ENST00000378702 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
DMD-209ENST00000378702 ITGAEP38570 1179 aa14.62□□□□□ -0.07
DMD-209ENST00000378702 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
DMD-209ENST00000378702 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
DMD-209ENST00000378702 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
DMD-209ENST00000378702 CDK11AQ9UQ88 783 aaPredicted RBP14.53□□□□□ -0.08
DMD-209ENST00000378702 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
DMD-209ENST00000378702 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.08
DMD-209ENST00000378702 NOP58Q9Y2X3 529 aaKnown RBP14.43□□□□□ -0.1
DMD-209ENST00000378702 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
DMD-209ENST00000378702 EEA1Q15075 1411 aa14.4□□□□□ -0.1
DMD-209ENST00000378702 NBR1Q14596 966 aa14.4□□□□□ -0.1
DMD-209ENST00000378702 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
DMD-209ENST00000378702 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
DMD-209ENST00000378702 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
DMD-209ENST00000378702 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
DMD-209ENST00000378702 NACADO15069 1562 aa14.38□□□□□ -0.11
DMD-209ENST00000378702 GOLGA3Q08378 1498 aa14.37□□□□□ -0.11
DMD-209ENST00000378702 TRIM52Q96A61 297 aa14.36□□□□□ -0.11
DMD-209ENST00000378702 SOGA1O94964 1423 aa14.34□□□□□ -0.11
DMD-209ENST00000378702 PAK3O75914 559 aaPredicted RBP14.33□□□□□ -0.11
DMD-209ENST00000378702 UBTFP17480 764 aaKnown RBP14.33□□□□□ -0.11
DMD-209ENST00000378702 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
DMD-209ENST00000378702 RTL5Q5HYW3 569 aaPredicted RBP14.32□□□□□ -0.12
DMD-209ENST00000378702 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
DMD-209ENST00000378702 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
DMD-209ENST00000378702 CLIP1P30622 1438 aa14.29□□□□□ -0.12
DMD-209ENST00000378702 PPP1R15AO75807 674 aaPredicted RBP14.28□□□□□ -0.12
DMD-209ENST00000378702 DDX10Q13206 875 aaKnown RBP14.28□□□□□ -0.12
DMD-209ENST00000378702 EIF5BO60841 1220 aaKnown RBP14.28□□□□□ -0.12
DMD-209ENST00000378702 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
DMD-209ENST00000378702 PPP4R2Q9NY27 417 aa14.28□□□□□ -0.12
DMD-209ENST00000378702 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
DMD-209ENST00000378702 CUX2O14529 1486 aa14.27□□□□□ -0.13
DMD-209ENST00000378702 WIZO95785 1651 aa14.26□□□□□ -0.13
DMD-209ENST00000378702 C11orf95C9JLR9 678 aaPredicted RBP14.26□□□□□ -0.13
DMD-209ENST00000378702 WASHC2AQ641Q2 1341 aa14.26□□□□□ -0.13
DMD-209ENST00000378702 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
DMD-209ENST00000378702 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
DMD-209ENST00000378702 RUSC2Q8N2Y8 1516 aa14.23□□□□□ -0.13
DMD-209ENST00000378702 ANP32CO43423 234 aa14.22□□□□□ -0.13
DMD-209ENST00000378702 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms