RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
PREX1-201ENST00000371941 NISCHQ9Y2I1 1504 aa23.12■■□□□ 1.29
PREX1-201ENST00000371941 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
PREX1-201ENST00000371941 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
PREX1-201ENST00000371941 EHMT2Q96KQ7 1210 aa22.62■■□□□ 1.21
PREX1-201ENST00000371941 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
PREX1-201ENST00000371941 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
PREX1-201ENST00000371941 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
PREX1-201ENST00000371941 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
PREX1-201ENST00000371941 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
PREX1-201ENST00000371941 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
PREX1-201ENST00000371941 APLP2Q06481 763 aa20.99■□□□□ 0.95
PREX1-201ENST00000371941 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
PREX1-201ENST00000371941 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
PREX1-201ENST00000371941 YTHDC1Q96MU7 727 aaKnown RBP20.78■□□□□ 0.92
PREX1-201ENST00000371941 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
PREX1-201ENST00000371941 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
PREX1-201ENST00000371941 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
PREX1-201ENST00000371941 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
PREX1-201ENST00000371941 HRCP23327 699 aa20.49■□□□□ 0.87
PREX1-201ENST00000371941 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
PREX1-201ENST00000371941 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
PREX1-201ENST00000371941 TRIM26Q12899 539 aaPredicted RBP20.43■□□□□ 0.86
PREX1-201ENST00000371941 ITGAEP38570 1179 aa20.34■□□□□ 0.85
PREX1-201ENST00000371941 HNRNPUL2Q1KMD3 747 aaKnown RBP20.24■□□□□ 0.83
PREX1-201ENST00000371941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.24■□□□□ 0.83
PREX1-201ENST00000371941 CNGB1Q14028 1251 aaPredicted RBP20.12■□□□□ 0.81
PREX1-201ENST00000371941 ERICH6Q7L0X2 663 aa20.09■□□□□ 0.81
PREX1-201ENST00000371941 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
PREX1-201ENST00000371941 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.78
PREX1-201ENST00000371941 NEFLP07196 543 aa19.88■□□□□ 0.77
PREX1-201ENST00000371941 ABCC9O60706 1549 aa19.87■□□□□ 0.77
PREX1-201ENST00000371941 DIEXFQ68CQ4 756 aaKnown RBP19.83■□□□□ 0.76
PREX1-201ENST00000371941 NEUROD1Q13562 356 aa19.64■□□□□ 0.73
PREX1-201ENST00000371941 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
PREX1-201ENST00000371941 BCANQ96GW7 911 aa19.62■□□□□ 0.73
PREX1-201ENST00000371941 GTF3C3Q9Y5Q9 886 aa19.61■□□□□ 0.73
PREX1-201ENST00000371941 MYT1LQ9UL68 1186 aa19.56■□□□□ 0.72
PREX1-201ENST00000371941 MYT1Q01538 1121 aa19.48■□□□□ 0.71
PREX1-201ENST00000371941 MYO15BQ96JP2 1530 aa19.44■□□□□ 0.7
PREX1-201ENST00000371941 P3H3Q8IVL6 736 aa19.44■□□□□ 0.7
PREX1-201ENST00000371941 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
PREX1-201ENST00000371941 ARID3CA6NKF2 412 aa19.43■□□□□ 0.7
PREX1-201ENST00000371941 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
PREX1-201ENST00000371941 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
PREX1-201ENST00000371941 ZNF326Q5BKZ1 582 aaKnown RBP19.3■□□□□ 0.68
PREX1-201ENST00000371941 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
PREX1-201ENST00000371941 ACIN1Q9UKV3 1341 aaKnown RBP19.2■□□□□ 0.66
PREX1-201ENST00000371941 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
PREX1-201ENST00000371941 CSRNP3Q8WYN3 585 aa19.16■□□□□ 0.66
PREX1-201ENST00000371941 FBLN2P98095 1184 aa19.14■□□□□ 0.66
PREX1-201ENST00000371941 DAXXQ9UER7 740 aaPredicted RBP19.14■□□□□ 0.66
PREX1-201ENST00000371941 ANP32CO43423 234 aa19.06■□□□□ 0.64
PREX1-201ENST00000371941 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
PREX1-201ENST00000371941 HIRIP3Q9BW71 556 aaPredicted RBP19.03■□□□□ 0.64
PREX1-201ENST00000371941 BCL11AQ9H165 835 aa19.01■□□□□ 0.63
PREX1-201ENST00000371941 DCAF1Q9Y4B6 1507 aa19.01■□□□□ 0.63
PREX1-201ENST00000371941 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
PREX1-201ENST00000371941 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
PREX1-201ENST00000371941 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
PREX1-201ENST00000371941 FKBP8Q14318 412 aa18.9■□□□□ 0.62
PREX1-201ENST00000371941 MIER1Q8N108 512 aa18.9■□□□□ 0.62
PREX1-201ENST00000371941 SENP3-EIF4A1A0A087X0R7 540 aa18.86■□□□□ 0.61
PREX1-201ENST00000371941 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
PREX1-201ENST00000371941 SALL2Q9Y467 1007 aaPredicted RBP18.84■□□□□ 0.61
PREX1-201ENST00000371941 RTL5Q5HYW3 569 aaPredicted RBP18.83■□□□□ 0.61
PREX1-201ENST00000371941 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.61
PREX1-201ENST00000371941 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
PREX1-201ENST00000371941 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
PREX1-201ENST00000371941 FAM9BQ8IZU0 186 aa18.78■□□□□ 0.6
PREX1-201ENST00000371941 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.59
PREX1-201ENST00000371941 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
PREX1-201ENST00000371941 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
PREX1-201ENST00000371941 SENP3Q9H4L4 574 aaPredicted RBP18.69■□□□□ 0.58
PREX1-201ENST00000371941 TONSLQ96HA7 1378 aa18.64■□□□□ 0.58
PREX1-201ENST00000371941 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
PREX1-201ENST00000371941 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
PREX1-201ENST00000371941 CANXP27824 592 aaKnown RBP18.59■□□□□ 0.57
PREX1-201ENST00000371941 KDM2AQ9Y2K7 1162 aa18.58■□□□□ 0.57
PREX1-201ENST00000371941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.57■□□□□ 0.56
PREX1-201ENST00000371941 CLIP1P30622 1438 aa18.57■□□□□ 0.56
PREX1-201ENST00000371941 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
PREX1-201ENST00000371941 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
PREX1-201ENST00000371941 NBR1Q14596 966 aa18.53■□□□□ 0.56
PREX1-201ENST00000371941 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
PREX1-201ENST00000371941 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
PREX1-201ENST00000371941 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
PREX1-201ENST00000371941 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
PREX1-201ENST00000371941 ANP32AP39687 249 aaKnown RBP18.43■□□□□ 0.54
PREX1-201ENST00000371941 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
PREX1-201ENST00000371941 SOGA1O94964 1423 aa18.39■□□□□ 0.53
PREX1-201ENST00000371941 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
PREX1-201ENST00000371941 ARXQ96QS3 562 aa18.38■□□□□ 0.53
PREX1-201ENST00000371941 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
PREX1-201ENST00000371941 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
PREX1-201ENST00000371941 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
PREX1-201ENST00000371941 CCDC136Q96JN2 1154 aa18.33■□□□□ 0.52
PREX1-201ENST00000371941 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
PREX1-201ENST00000371941 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
PREX1-201ENST00000371941 RGL3Q3MIN7 710 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms