RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
PCDHA4-204ENST00000618834 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
PCDHA4-204ENST00000618834 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
PCDHA4-204ENST00000618834 MYT1Q01538 1121 aa18.14■□□□□ 0.5
PCDHA4-204ENST00000618834 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
PCDHA4-204ENST00000618834 CCER1Q8TC90 406 aaPredicted RBP18.02■□□□□ 0.48
PCDHA4-204ENST00000618834 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
PCDHA4-204ENST00000618834 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
PCDHA4-204ENST00000618834 APLP2Q06481 763 aa17.75■□□□□ 0.43
PCDHA4-204ENST00000618834 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
PCDHA4-204ENST00000618834 NEFLP07196 543 aa17.52■□□□□ 0.4
PCDHA4-204ENST00000618834 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.39
PCDHA4-204ENST00000618834 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
PCDHA4-204ENST00000618834 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
PCDHA4-204ENST00000618834 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
PCDHA4-204ENST00000618834 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
PCDHA4-204ENST00000618834 DAXXQ9UER7 740 aaPredicted RBP17.24■□□□□ 0.35
PCDHA4-204ENST00000618834 NISCHQ9Y2I1 1504 aa17.18■□□□□ 0.34
PCDHA4-204ENST00000618834 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
PCDHA4-204ENST00000618834 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
PCDHA4-204ENST00000618834 ZNF316A6NFI3 1004 aaPredicted RBP16.83■□□□□ 0.29
PCDHA4-204ENST00000618834 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
PCDHA4-204ENST00000618834 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
PCDHA4-204ENST00000618834 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
PCDHA4-204ENST00000618834 HRCP23327 699 aa16.63■□□□□ 0.25
PCDHA4-204ENST00000618834 TRIM26Q12899 539 aaPredicted RBP16.6■□□□□ 0.25
PCDHA4-204ENST00000618834 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
PCDHA4-204ENST00000618834 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
PCDHA4-204ENST00000618834 PPARGC1BQ86YN6 1023 aaKnown RBP16.46■□□□□ 0.23
PCDHA4-204ENST00000618834 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.21
PCDHA4-204ENST00000618834 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
PCDHA4-204ENST00000618834 ITGAEP38570 1179 aa16.28■□□□□ 0.2
PCDHA4-204ENST00000618834 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
PCDHA4-204ENST00000618834 GLIPR1L2Q4G1C9 344 aa16.24■□□□□ 0.19
PCDHA4-204ENST00000618834 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
PCDHA4-204ENST00000618834 BCANQ96GW7 911 aa16.19■□□□□ 0.18
PCDHA4-204ENST00000618834 MYT1LQ9UL68 1186 aa16.19■□□□□ 0.18
PCDHA4-204ENST00000618834 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
PCDHA4-204ENST00000618834 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
PCDHA4-204ENST00000618834 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
PCDHA4-204ENST00000618834 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
PCDHA4-204ENST00000618834 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
PCDHA4-204ENST00000618834 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
PCDHA4-204ENST00000618834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
PCDHA4-204ENST00000618834 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
PCDHA4-204ENST00000618834 CANXP27824 592 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-204ENST00000618834 ANP32CO43423 234 aa16■□□□□ 0.15
PCDHA4-204ENST00000618834 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
PCDHA4-204ENST00000618834 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
PCDHA4-204ENST00000618834 BCL11AQ9H165 835 aa15.86■□□□□ 0.13
PCDHA4-204ENST00000618834 HSP90AA1P07900 732 aaKnown RBP15.85■□□□□ 0.13
PCDHA4-204ENST00000618834 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
PCDHA4-204ENST00000618834 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
PCDHA4-204ENST00000618834 NEUROD1Q13562 356 aa15.82■□□□□ 0.12
PCDHA4-204ENST00000618834 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
PCDHA4-204ENST00000618834 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
PCDHA4-204ENST00000618834 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
PCDHA4-204ENST00000618834 ZNF326Q5BKZ1 582 aaKnown RBP15.74■□□□□ 0.11
PCDHA4-204ENST00000618834 NBR1Q14596 966 aa15.72■□□□□ 0.11
PCDHA4-204ENST00000618834 NEFMP07197 916 aa15.72■□□□□ 0.11
PCDHA4-204ENST00000618834 TNNT2P45379 298 aaPredicted RBP15.64■□□□□ 0.09
PCDHA4-204ENST00000618834 ARXQ96QS3 562 aa15.62■□□□□ 0.09
PCDHA4-204ENST00000618834 FKBP8Q14318 412 aa15.6■□□□□ 0.09
PCDHA4-204ENST00000618834 CDK11BP21127 795 aaKnown RBP15.49■□□□□ 0.07
PCDHA4-204ENST00000618834 TRIM44Q96DX7 344 aaPredicted RBP15.46■□□□□ 0.06
PCDHA4-204ENST00000618834 CCDC136Q96JN2 1154 aa15.45■□□□□ 0.06
PCDHA4-204ENST00000618834 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.43■□□□□ 0.06
PCDHA4-204ENST00000618834 HNRNPUQ00839 825 aaKnown RBP eCLIP15.41■□□□□ 0.06
PCDHA4-204ENST00000618834 ANP32EQ9BTT0 268 aa15.4■□□□□ 0.06
PCDHA4-204ENST00000618834 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
PCDHA4-204ENST00000618834 BECN1Q14457 450 aa15.39■□□□□ 0.05
PCDHA4-204ENST00000618834 TONSLQ96HA7 1378 aa15.33■□□□□ 0.04
PCDHA4-204ENST00000618834 NCLP19338 710 aaKnown RBP15.33■□□□□ 0.04
PCDHA4-204ENST00000618834 MYH16Q9H6N6 1097 aa15.32■□□□□ 0.04
PCDHA4-204ENST00000618834 NAP1L5Q96NT1 182 aaPredicted RBP15.32■□□□□ 0.04
PCDHA4-204ENST00000618834 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
PCDHA4-204ENST00000618834 PTMAP06454 111 aaKnown RBP15.31■□□□□ 0.04
PCDHA4-204ENST00000618834 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
PCDHA4-204ENST00000618834 ERICH6BQ5W0A0 696 aa15.3■□□□□ 0.04
PCDHA4-204ENST00000618834 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
PCDHA4-204ENST00000618834 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.04
PCDHA4-204ENST00000618834 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
PCDHA4-204ENST00000618834 DCAF1Q9Y4B6 1507 aa15.21■□□□□ 0.03
PCDHA4-204ENST00000618834 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
PCDHA4-204ENST00000618834 WDR43Q15061 677 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHA4-204ENST00000618834 SALL2Q9Y467 1007 aaPredicted RBP15.18■□□□□ 0.02
PCDHA4-204ENST00000618834 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
PCDHA4-204ENST00000618834 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
PCDHA4-204ENST00000618834 IRX6P78412 446 aaPredicted RBP15.16■□□□□ 0.02
PCDHA4-204ENST00000618834 RTN4Q9NQC3 1192 aaKnown RBP15.16■□□□□ 0.02
PCDHA4-204ENST00000618834 GOLGA6L6A8MZA4 724 aa15.14■□□□□ 0.01
PCDHA4-204ENST00000618834 CASC1Q6TDU7 716 aa15.13■□□□□ 0.01
PCDHA4-204ENST00000618834 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
PCDHA4-204ENST00000618834 PPM1GO15355 546 aaPredicted RBP15.11■□□□□ 0.01
PCDHA4-204ENST00000618834 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
PCDHA4-204ENST00000618834 NOP58Q9Y2X3 529 aaKnown RBP15.06■□□□□ 0
PCDHA4-204ENST00000618834 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
PCDHA4-204ENST00000618834 AMER1Q5JTC6 1135 aaPredicted RBP15.05■□□□□ 0
PCDHA4-204ENST00000618834 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
PCDHA4-204ENST00000618834 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms