RNA–Protein interactions for RNA: ENST00000395324.6

VDR-202, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VDR, Length 4,762 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-202ENST00000395324 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
VDR-202ENST00000395324 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
VDR-202ENST00000395324 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
VDR-202ENST00000395324 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
VDR-202ENST00000395324 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
VDR-202ENST00000395324 APLP2Q06481 763 aa19.81■□□□□ 0.76
VDR-202ENST00000395324 FAM9AQ8IZU1 332 aaPredicted RBP19.71■□□□□ 0.75
VDR-202ENST00000395324 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
VDR-202ENST00000395324 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
VDR-202ENST00000395324 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
VDR-202ENST00000395324 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
VDR-202ENST00000395324 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
VDR-202ENST00000395324 ATP1B4Q9UN42 357 aaPredicted RBP19.12■□□□□ 0.65
VDR-202ENST00000395324 PCGF6Q9BYE7 350 aa19.08■□□□□ 0.65
VDR-202ENST00000395324 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
VDR-202ENST00000395324 CCER1Q8TC90 406 aaPredicted RBP18.88■□□□□ 0.61
VDR-202ENST00000395324 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
VDR-202ENST00000395324 ABCC9O60706 1549 aa18.58■□□□□ 0.57
VDR-202ENST00000395324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
VDR-202ENST00000395324 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
VDR-202ENST00000395324 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
VDR-202ENST00000395324 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
VDR-202ENST00000395324 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
VDR-202ENST00000395324 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
VDR-202ENST00000395324 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
VDR-202ENST00000395324 MYT1Q01538 1121 aa18.38■□□□□ 0.53
VDR-202ENST00000395324 ITGAEP38570 1179 aa18.38■□□□□ 0.53
VDR-202ENST00000395324 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.53
VDR-202ENST00000395324 NEFLP07196 543 aa18.33■□□□□ 0.52
VDR-202ENST00000395324 ERICH6Q7L0X2 663 aa18.25■□□□□ 0.51
VDR-202ENST00000395324 YTHDC1Q96MU7 727 aaKnown RBP18.15■□□□□ 0.5
VDR-202ENST00000395324 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
VDR-202ENST00000395324 HRCP23327 699 aa18.02■□□□□ 0.47
VDR-202ENST00000395324 FAM50AQ14320 339 aaKnown RBP18■□□□□ 0.47
VDR-202ENST00000395324 FBLN2P98095 1184 aa17.98■□□□□ 0.47
VDR-202ENST00000395324 CCDC180Q9P1Z9 1646 aa17.97■□□□□ 0.47
VDR-202ENST00000395324 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
VDR-202ENST00000395324 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
VDR-202ENST00000395324 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
VDR-202ENST00000395324 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
VDR-202ENST00000395324 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
VDR-202ENST00000395324 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
VDR-202ENST00000395324 NEUROD1Q13562 356 aa17.7■□□□□ 0.42
VDR-202ENST00000395324 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
VDR-202ENST00000395324 P3H3Q8IVL6 736 aa17.68■□□□□ 0.42
VDR-202ENST00000395324 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
VDR-202ENST00000395324 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
VDR-202ENST00000395324 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
VDR-202ENST00000395324 ARID3CA6NKF2 412 aa17.59■□□□□ 0.41
VDR-202ENST00000395324 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
VDR-202ENST00000395324 NPM1P06748 294 aaKnown RBP eCLIP17.51■□□□□ 0.39
VDR-202ENST00000395324 ANP32CO43423 234 aa17.49■□□□□ 0.39
VDR-202ENST00000395324 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
VDR-202ENST00000395324 BCANQ96GW7 911 aa17.45■□□□□ 0.38
VDR-202ENST00000395324 ESF1Q9H501 851 aaKnown RBP17.45■□□□□ 0.38
VDR-202ENST00000395324 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.38
VDR-202ENST00000395324 NEFMP07197 916 aa17.36■□□□□ 0.37
VDR-202ENST00000395324 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
VDR-202ENST00000395324 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
VDR-202ENST00000395324 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
VDR-202ENST00000395324 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
VDR-202ENST00000395324 TSPY4P0CV99 314 aa17.25■□□□□ 0.35
VDR-202ENST00000395324 TSPY10P0CW01 314 aa17.25■□□□□ 0.35
VDR-202ENST00000395324 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
VDR-202ENST00000395324 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
VDR-202ENST00000395324 NACADO15069 1562 aa17.23■□□□□ 0.35
VDR-202ENST00000395324 SLC24A1O60721 1099 aa17.21■□□□□ 0.35
VDR-202ENST00000395324 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
VDR-202ENST00000395324 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
VDR-202ENST00000395324 RTL5Q5HYW3 569 aaPredicted RBP17.17■□□□□ 0.34
VDR-202ENST00000395324 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
VDR-202ENST00000395324 CHIC2Q9UKJ5 165 aa17.15■□□□□ 0.34
VDR-202ENST00000395324 EEA1Q15075 1411 aa17.14■□□□□ 0.33
VDR-202ENST00000395324 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
VDR-202ENST00000395324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
VDR-202ENST00000395324 CLIP1P30622 1438 aa17.11■□□□□ 0.33
VDR-202ENST00000395324 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
VDR-202ENST00000395324 PLEKHD1A6NEE1 506 aa17.08■□□□□ 0.32
VDR-202ENST00000395324 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
VDR-202ENST00000395324 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
VDR-202ENST00000395324 GTF3C3Q9Y5Q9 886 aa17.02■□□□□ 0.32
VDR-202ENST00000395324 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
VDR-202ENST00000395324 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
VDR-202ENST00000395324 KCNH8Q96L42 1107 aa17■□□□□ 0.31
VDR-202ENST00000395324 GOLGA3Q08378 1498 aa16.98■□□□□ 0.31
VDR-202ENST00000395324 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
VDR-202ENST00000395324 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
VDR-202ENST00000395324 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
VDR-202ENST00000395324 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
VDR-202ENST00000395324 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
VDR-202ENST00000395324 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
VDR-202ENST00000395324 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
VDR-202ENST00000395324 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
VDR-202ENST00000395324 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
VDR-202ENST00000395324 CEP162Q5TB80 1403 aa16.88■□□□□ 0.29
VDR-202ENST00000395324 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
VDR-202ENST00000395324 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
VDR-202ENST00000395324 PPP1R15AO75807 674 aaPredicted RBP16.85■□□□□ 0.29
VDR-202ENST00000395324 MYO15BQ96JP2 1530 aa16.85■□□□□ 0.29
VDR-202ENST00000395324 EIF4G2P78344 907 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms