RNA–Protein interactions for RNA: ENST00000444724.5

CARF-216, Transcript of calcium responsive transcription factor, humanhuman

TSL 1 (best) BASIC

Gene CARF, Length 2,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-216ENST00000444724 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
CARF-216ENST00000444724 CCDC180Q9P1Z9 1646 aa19.61■□□□□ 0.73
CARF-216ENST00000444724 ABCC9O60706 1549 aa18.93■□□□□ 0.62
CARF-216ENST00000444724 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
CARF-216ENST00000444724 NACADO15069 1562 aa18.41■□□□□ 0.54
CARF-216ENST00000444724 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
CARF-216ENST00000444724 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
CARF-216ENST00000444724 ZCCHC6Q5VYS8 1495 aaKnown RBP18.02■□□□□ 0.48
CARF-216ENST00000444724 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
CARF-216ENST00000444724 UNC13AQ9UPW8 1703 aa17.94■□□□□ 0.46
CARF-216ENST00000444724 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
CARF-216ENST00000444724 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.41
CARF-216ENST00000444724 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
CARF-216ENST00000444724 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
CARF-216ENST00000444724 PABPN1Q86U42 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
CARF-216ENST00000444724 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
CARF-216ENST00000444724 CC2D2AQ9P2K1 1620 aa17.29■□□□□ 0.36
CARF-216ENST00000444724 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
CARF-216ENST00000444724 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
CARF-216ENST00000444724 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
CARF-216ENST00000444724 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
CARF-216ENST00000444724 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
CARF-216ENST00000444724 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
CARF-216ENST00000444724 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
CARF-216ENST00000444724 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
CARF-216ENST00000444724 CUX2O14529 1486 aa16.61■□□□□ 0.25
CARF-216ENST00000444724 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
CARF-216ENST00000444724 LAMC3Q9Y6N6 1575 aa16.56■□□□□ 0.24
CARF-216ENST00000444724 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
CARF-216ENST00000444724 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
CARF-216ENST00000444724 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
CARF-216ENST00000444724 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
CARF-216ENST00000444724 WIZO95785 1651 aa16.35■□□□□ 0.21
CARF-216ENST00000444724 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
CARF-216ENST00000444724 NESP48681 1621 aa16.3■□□□□ 0.2
CARF-216ENST00000444724 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
CARF-216ENST00000444724 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
CARF-216ENST00000444724 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
CARF-216ENST00000444724 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
CARF-216ENST00000444724 WDR62O43379 1518 aa16.24■□□□□ 0.19
CARF-216ENST00000444724 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
CARF-216ENST00000444724 CFTRP13569 1480 aa16.21■□□□□ 0.19
CARF-216ENST00000444724 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
CARF-216ENST00000444724 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
CARF-216ENST00000444724 FANCD2Q9BXW9 1451 aa16.09■□□□□ 0.17
CARF-216ENST00000444724 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
CARF-216ENST00000444724 ABCC8Q09428 1581 aa16■□□□□ 0.15
CARF-216ENST00000444724 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
CARF-216ENST00000444724 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
CARF-216ENST00000444724 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
CARF-216ENST00000444724 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
CARF-216ENST00000444724 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
CARF-216ENST00000444724 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
CARF-216ENST00000444724 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
CARF-216ENST00000444724 EIF4G3O43432 1585 aaKnown RBP15.7■□□□□ 0.1
CARF-216ENST00000444724 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
CARF-216ENST00000444724 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
CARF-216ENST00000444724 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
CARF-216ENST00000444724 CUX1P39880 1505 aa15.58■□□□□ 0.09
CARF-216ENST00000444724 BIVM-ERCC5R4GMW8 1640 aa15.55■□□□□ 0.08
CARF-216ENST00000444724 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
CARF-216ENST00000444724 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
CARF-216ENST00000444724 SOGA1O94964 1423 aa15.53■□□□□ 0.08
CARF-216ENST00000444724 CHD1O14646 1710 aa15.53■□□□□ 0.08
CARF-216ENST00000444724 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
CARF-216ENST00000444724 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
CARF-216ENST00000444724 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
CARF-216ENST00000444724 RIMBP3CA6NJZ7 1639 aa15.49■□□□□ 0.07
CARF-216ENST00000444724 RIMBP3BA6NNM3 1639 aa15.49■□□□□ 0.07
CARF-216ENST00000444724 RIMBP3Q9UFD9 1639 aa15.49■□□□□ 0.07
CARF-216ENST00000444724 PBRM1Q86U86 1689 aa15.49■□□□□ 0.07
CARF-216ENST00000444724 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
CARF-216ENST00000444724 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
CARF-216ENST00000444724 SYNJ1O43426 1573 aa15.46■□□□□ 0.06
CARF-216ENST00000444724 AQRO60306 1485 aaKnown RBP eCLIP15.45■□□□□ 0.06
CARF-216ENST00000444724 RAD54L2Q9Y4B4 1467 aa15.45■□□□□ 0.06
CARF-216ENST00000444724 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
CARF-216ENST00000444724 SYNJ2O15056 1496 aa15.43■□□□□ 0.06
CARF-216ENST00000444724 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
CARF-216ENST00000444724 GAPVD1Q14C86 1478 aa15.39■□□□□ 0.05
CARF-216ENST00000444724 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
CARF-216ENST00000444724 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
CARF-216ENST00000444724 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
CARF-216ENST00000444724 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
CARF-216ENST00000444724 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
CARF-216ENST00000444724 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
CARF-216ENST00000444724 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
CARF-216ENST00000444724 NUP160Q12769 1436 aa15.27■□□□□ 0.04
CARF-216ENST00000444724 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
CARF-216ENST00000444724 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
CARF-216ENST00000444724 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
CARF-216ENST00000444724 CUL7Q14999 1698 aa15.21■□□□□ 0.03
CARF-216ENST00000444724 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
CARF-216ENST00000444724 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
CARF-216ENST00000444724 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
CARF-216ENST00000444724 FBLN2P98095 1184 aa15.11■□□□□ 0.01
CARF-216ENST00000444724 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
CARF-216ENST00000444724 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
CARF-216ENST00000444724 CYB5RLQ6IPT4 315 aa15.02□□□□□ -0.01
CARF-216ENST00000444724 IGF1RP08069 1367 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms