RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
CTCFL-222ENST00000609232 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
CTCFL-222ENST00000609232 CCDC180Q9P1Z9 1646 aa17.96■□□□□ 0.47
CTCFL-222ENST00000609232 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
CTCFL-222ENST00000609232 SUPT5HO00267 1087 aaKnown RBP17.63■□□□□ 0.41
CTCFL-222ENST00000609232 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
CTCFL-222ENST00000609232 ABCC9O60706 1549 aa17.36■□□□□ 0.37
CTCFL-222ENST00000609232 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
CTCFL-222ENST00000609232 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
CTCFL-222ENST00000609232 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
CTCFL-222ENST00000609232 NACADO15069 1562 aa16.83■□□□□ 0.29
CTCFL-222ENST00000609232 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
CTCFL-222ENST00000609232 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
CTCFL-222ENST00000609232 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-222ENST00000609232 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
CTCFL-222ENST00000609232 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
CTCFL-222ENST00000609232 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.21
CTCFL-222ENST00000609232 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
CTCFL-222ENST00000609232 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
CTCFL-222ENST00000609232 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
CTCFL-222ENST00000609232 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
CTCFL-222ENST00000609232 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
CTCFL-222ENST00000609232 UNC13AQ9UPW8 1703 aa16.23■□□□□ 0.19
CTCFL-222ENST00000609232 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
CTCFL-222ENST00000609232 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
CTCFL-222ENST00000609232 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
CTCFL-222ENST00000609232 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
CTCFL-222ENST00000609232 WIZO95785 1651 aa16.1■□□□□ 0.17
CTCFL-222ENST00000609232 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
CTCFL-222ENST00000609232 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
CTCFL-222ENST00000609232 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
CTCFL-222ENST00000609232 CCDC88BA6NC98 1476 aa15.82■□□□□ 0.12
CTCFL-222ENST00000609232 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
CTCFL-222ENST00000609232 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
CTCFL-222ENST00000609232 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
CTCFL-222ENST00000609232 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
CTCFL-222ENST00000609232 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
CTCFL-222ENST00000609232 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
CTCFL-222ENST00000609232 NCAPD3P42695 1498 aa15.59■□□□□ 0.09
CTCFL-222ENST00000609232 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
CTCFL-222ENST00000609232 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
CTCFL-222ENST00000609232 CC2D2AQ9P2K1 1620 aa15.5■□□□□ 0.07
CTCFL-222ENST00000609232 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
CTCFL-222ENST00000609232 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
CTCFL-222ENST00000609232 HRCP23327 699 aa15.48■□□□□ 0.07
CTCFL-222ENST00000609232 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
CTCFL-222ENST00000609232 SOGA1O94964 1423 aa15.38■□□□□ 0.05
CTCFL-222ENST00000609232 CSRNP3Q8WYN3 585 aa15.37■□□□□ 0.05
CTCFL-222ENST00000609232 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
CTCFL-222ENST00000609232 CADPSQ9ULU8 1353 aa15.33■□□□□ 0.05
CTCFL-222ENST00000609232 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
CTCFL-222ENST00000609232 CFTRP13569 1480 aa15.3■□□□□ 0.04
CTCFL-222ENST00000609232 SYNJ1O43426 1573 aa15.29■□□□□ 0.04
CTCFL-222ENST00000609232 ITGAEP38570 1179 aa15.28■□□□□ 0.04
CTCFL-222ENST00000609232 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
CTCFL-222ENST00000609232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
CTCFL-222ENST00000609232 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
CTCFL-222ENST00000609232 EEA1Q15075 1411 aa15.22■□□□□ 0.03
CTCFL-222ENST00000609232 NESP48681 1621 aa15.21■□□□□ 0.03
CTCFL-222ENST00000609232 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
CTCFL-222ENST00000609232 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
CTCFL-222ENST00000609232 CUX1P39880 1505 aa15.15■□□□□ 0.02
CTCFL-222ENST00000609232 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
CTCFL-222ENST00000609232 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
CTCFL-222ENST00000609232 P3H3Q8IVL6 736 aa15.13■□□□□ 0.01
CTCFL-222ENST00000609232 APLP2Q06481 763 aa15.11■□□□□ 0.01
CTCFL-222ENST00000609232 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
CTCFL-222ENST00000609232 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
CTCFL-222ENST00000609232 TRIM26Q12899 539 aaPredicted RBP15.08■□□□□ 0
CTCFL-222ENST00000609232 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
CTCFL-222ENST00000609232 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
CTCFL-222ENST00000609232 CEP162Q5TB80 1403 aa15.07■□□□□ 0
CTCFL-222ENST00000609232 PDS5BQ9NTI5 1447 aa15.06■□□□□ 0
CTCFL-222ENST00000609232 CUX2O14529 1486 aa15.06■□□□□ 0
CTCFL-222ENST00000609232 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ -0
CTCFL-222ENST00000609232 FGD5Q6ZNL6 1462 aa15.04■□□□□ -0
CTCFL-222ENST00000609232 RAPGEF2Q9Y4G8 1499 aa15.02■□□□□ -0
CTCFL-222ENST00000609232 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
CTCFL-222ENST00000609232 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
CTCFL-222ENST00000609232 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
CTCFL-222ENST00000609232 CLIP1P30622 1438 aa14.96□□□□□ -0.01
CTCFL-222ENST00000609232 TOPBP1Q92547 1522 aa14.96□□□□□ -0.01
CTCFL-222ENST00000609232 YTHDC1Q96MU7 727 aaKnown RBP14.93□□□□□ -0.02
CTCFL-222ENST00000609232 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
CTCFL-222ENST00000609232 DNMBPQ6XZF7 1577 aa14.92□□□□□ -0.02
CTCFL-222ENST00000609232 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
CTCFL-222ENST00000609232 IGF1RP08069 1367 aa14.92□□□□□ -0.02
CTCFL-222ENST00000609232 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
CTCFL-222ENST00000609232 KIF21BO75037 1637 aa14.92□□□□□ -0.02
CTCFL-222ENST00000609232 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
CTCFL-222ENST00000609232 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
CTCFL-222ENST00000609232 MYT1Q01538 1121 aa14.88□□□□□ -0.03
CTCFL-222ENST00000609232 PRXQ9BXM0 1461 aa14.88□□□□□ -0.03
CTCFL-222ENST00000609232 CNGB1Q14028 1251 aaPredicted RBP14.86□□□□□ -0.03
CTCFL-222ENST00000609232 FBLN2P98095 1184 aa14.86□□□□□ -0.03
CTCFL-222ENST00000609232 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
CTCFL-222ENST00000609232 ERICH3Q5RHP9 1530 aa14.8□□□□□ -0.04
CTCFL-222ENST00000609232 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
CTCFL-222ENST00000609232 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
CTCFL-222ENST00000609232 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms