RNA–Protein interactions for RNA: ENST00000438828.3

CARF-213, Transcript of calcium responsive transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARF, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-213ENST00000438828 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
CARF-213ENST00000438828 SUPT5HO00267 1087 aaKnown RBP20.79■□□□□ 0.92
CARF-213ENST00000438828 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
CARF-213ENST00000438828 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
CARF-213ENST00000438828 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
CARF-213ENST00000438828 HRCP23327 699 aa20.3■□□□□ 0.84
CARF-213ENST00000438828 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
CARF-213ENST00000438828 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
CARF-213ENST00000438828 LOC105371045A0A1W2PR82 267 aa19.68■□□□□ 0.74
CARF-213ENST00000438828 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
CARF-213ENST00000438828 MYO15BQ96JP2 1530 aa19.56■□□□□ 0.72
CARF-213ENST00000438828 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
CARF-213ENST00000438828 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
CARF-213ENST00000438828 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
CARF-213ENST00000438828 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
CARF-213ENST00000438828 SCAF1Q9H7N4 1312 aaKnown RBP19.2■□□□□ 0.66
CARF-213ENST00000438828 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
CARF-213ENST00000438828 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
CARF-213ENST00000438828 CCER1Q8TC90 406 aaPredicted RBP19.02■□□□□ 0.64
CARF-213ENST00000438828 DCAF1Q9Y4B6 1507 aa19.01■□□□□ 0.63
CARF-213ENST00000438828 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
CARF-213ENST00000438828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
CARF-213ENST00000438828 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
CARF-213ENST00000438828 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
CARF-213ENST00000438828 NEUROD1Q13562 356 aa18.83■□□□□ 0.61
CARF-213ENST00000438828 ACIN1Q9UKV3 1341 aaKnown RBP18.83■□□□□ 0.6
CARF-213ENST00000438828 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
CARF-213ENST00000438828 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
CARF-213ENST00000438828 MYT1Q01538 1121 aa18.74■□□□□ 0.59
CARF-213ENST00000438828 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
CARF-213ENST00000438828 ABCC9O60706 1549 aa18.42■□□□□ 0.54
CARF-213ENST00000438828 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
CARF-213ENST00000438828 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
CARF-213ENST00000438828 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
CARF-213ENST00000438828 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
CARF-213ENST00000438828 MIER1Q8N108 512 aa18.2■□□□□ 0.5
CARF-213ENST00000438828 APLP2Q06481 763 aa18.14■□□□□ 0.49
CARF-213ENST00000438828 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
CARF-213ENST00000438828 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
CARF-213ENST00000438828 BCANQ96GW7 911 aa18.02■□□□□ 0.48
CARF-213ENST00000438828 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
CARF-213ENST00000438828 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
CARF-213ENST00000438828 ITGAEP38570 1179 aa17.84■□□□□ 0.45
CARF-213ENST00000438828 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
CARF-213ENST00000438828 NEFLP07196 543 aa17.77■□□□□ 0.43
CARF-213ENST00000438828 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
CARF-213ENST00000438828 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
CARF-213ENST00000438828 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
CARF-213ENST00000438828 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
CARF-213ENST00000438828 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
CARF-213ENST00000438828 FKBP8Q14318 412 aa17.67■□□□□ 0.42
CARF-213ENST00000438828 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
CARF-213ENST00000438828 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
CARF-213ENST00000438828 SOGA1O94964 1423 aa17.57■□□□□ 0.4
CARF-213ENST00000438828 CLSPNQ9HAW4 1339 aa17.52■□□□□ 0.4
CARF-213ENST00000438828 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CARF-213ENST00000438828 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
CARF-213ENST00000438828 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
CARF-213ENST00000438828 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
CARF-213ENST00000438828 KCNH8Q96L42 1107 aa17.5■□□□□ 0.39
CARF-213ENST00000438828 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
CARF-213ENST00000438828 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
CARF-213ENST00000438828 ATP1B4Q9UN42 357 aaPredicted RBP17.49■□□□□ 0.39
CARF-213ENST00000438828 HIRIP3Q9BW71 556 aaPredicted RBP17.46■□□□□ 0.39
CARF-213ENST00000438828 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
CARF-213ENST00000438828 CLIP1P30622 1438 aa17.41■□□□□ 0.38
CARF-213ENST00000438828 IRX6P78412 446 aaPredicted RBP17.39■□□□□ 0.37
CARF-213ENST00000438828 WIZO95785 1651 aa17.39■□□□□ 0.37
CARF-213ENST00000438828 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
CARF-213ENST00000438828 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
CARF-213ENST00000438828 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
CARF-213ENST00000438828 ANP32CO43423 234 aa17.31■□□□□ 0.36
CARF-213ENST00000438828 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
CARF-213ENST00000438828 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
CARF-213ENST00000438828 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
CARF-213ENST00000438828 EEA1Q15075 1411 aa17.21■□□□□ 0.35
CARF-213ENST00000438828 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
CARF-213ENST00000438828 KANK4Q5T7N3 995 aaPredicted RBP17.2■□□□□ 0.34
CARF-213ENST00000438828 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
CARF-213ENST00000438828 DHX57Q6P158 1386 aaKnown RBP17.19■□□□□ 0.34
CARF-213ENST00000438828 NBR1Q14596 966 aa17.17■□□□□ 0.34
CARF-213ENST00000438828 VPS8Q8N3P4 1428 aa17.16■□□□□ 0.34
CARF-213ENST00000438828 NACADO15069 1562 aa17.14■□□□□ 0.33
CARF-213ENST00000438828 CEP164Q9UPV0 1460 aa17.14■□□□□ 0.33
CARF-213ENST00000438828 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
CARF-213ENST00000438828 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
CARF-213ENST00000438828 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
CARF-213ENST00000438828 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
CARF-213ENST00000438828 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
CARF-213ENST00000438828 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
CARF-213ENST00000438828 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
CARF-213ENST00000438828 MSH5O43196 834 aa16.99■□□□□ 0.31
CARF-213ENST00000438828 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
CARF-213ENST00000438828 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
CARF-213ENST00000438828 B4GALNT3Q6L9W6 998 aa16.97■□□□□ 0.31
CARF-213ENST00000438828 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.3
CARF-213ENST00000438828 TONSLQ96HA7 1378 aa16.95■□□□□ 0.3
CARF-213ENST00000438828 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
CARF-213ENST00000438828 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
CARF-213ENST00000438828 RTN4Q9NQC3 1192 aaKnown RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms