RNA–Protein interactions for RNA: ENST00000393504.5

CNGA3-203, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CNGA3, Length 3,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-203ENST00000393504 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
CNGA3-203ENST00000393504 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
CNGA3-203ENST00000393504 DCAF8L2P0C7V8 631 aa22.45■■□□□ 1.18
CNGA3-203ENST00000393504 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
CNGA3-203ENST00000393504 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
CNGA3-203ENST00000393504 ABCC9O60706 1549 aa21.66■■□□□ 1.06
CNGA3-203ENST00000393504 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
CNGA3-203ENST00000393504 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
CNGA3-203ENST00000393504 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
CNGA3-203ENST00000393504 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
CNGA3-203ENST00000393504 NACADO15069 1562 aa21.08■□□□□ 0.97
CNGA3-203ENST00000393504 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
CNGA3-203ENST00000393504 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
CNGA3-203ENST00000393504 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
CNGA3-203ENST00000393504 CECR2Q9BXF3 1484 aa20.62■□□□□ 0.89
CNGA3-203ENST00000393504 CHIC1Q5VXU3 224 aa20.6■□□□□ 0.89
CNGA3-203ENST00000393504 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
CNGA3-203ENST00000393504 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
CNGA3-203ENST00000393504 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
CNGA3-203ENST00000393504 WIZO95785 1651 aa20.29■□□□□ 0.84
CNGA3-203ENST00000393504 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
CNGA3-203ENST00000393504 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
CNGA3-203ENST00000393504 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
CNGA3-203ENST00000393504 PCGF6Q9BYE7 350 aa20.11■□□□□ 0.81
CNGA3-203ENST00000393504 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.8
CNGA3-203ENST00000393504 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
CNGA3-203ENST00000393504 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
CNGA3-203ENST00000393504 HRCP23327 699 aa19.98■□□□□ 0.79
CNGA3-203ENST00000393504 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
CNGA3-203ENST00000393504 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
CNGA3-203ENST00000393504 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
CNGA3-203ENST00000393504 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
CNGA3-203ENST00000393504 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
CNGA3-203ENST00000393504 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
CNGA3-203ENST00000393504 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
CNGA3-203ENST00000393504 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
CNGA3-203ENST00000393504 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
CNGA3-203ENST00000393504 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
CNGA3-203ENST00000393504 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
CNGA3-203ENST00000393504 SOGA1O94964 1423 aa19.44■□□□□ 0.7
CNGA3-203ENST00000393504 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
CNGA3-203ENST00000393504 PELP1Q8IZL8 1130 aaKnown RBP19.4■□□□□ 0.7
CNGA3-203ENST00000393504 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
CNGA3-203ENST00000393504 CC2D2AQ9P2K1 1620 aa19.37■□□□□ 0.69
CNGA3-203ENST00000393504 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
CNGA3-203ENST00000393504 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
CNGA3-203ENST00000393504 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
CNGA3-203ENST00000393504 RANGAP1P46060 587 aaPredicted RBP19.24■□□□□ 0.67
CNGA3-203ENST00000393504 CFTRP13569 1480 aa19.22■□□□□ 0.67
CNGA3-203ENST00000393504 EEA1Q15075 1411 aa19.21■□□□□ 0.67
CNGA3-203ENST00000393504 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
CNGA3-203ENST00000393504 TRIM26Q12899 539 aaPredicted RBP19.18■□□□□ 0.66
CNGA3-203ENST00000393504 TTBK1Q5TCY1 1321 aaPredicted RBP19.18■□□□□ 0.66
CNGA3-203ENST00000393504 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
CNGA3-203ENST00000393504 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
CNGA3-203ENST00000393504 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
CNGA3-203ENST00000393504 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
CNGA3-203ENST00000393504 CUX1P39880 1505 aa19.08■□□□□ 0.64
CNGA3-203ENST00000393504 TNIKQ9UKE5 1360 aa19.07■□□□□ 0.64
CNGA3-203ENST00000393504 NESP48681 1621 aa19.05■□□□□ 0.64
CNGA3-203ENST00000393504 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
CNGA3-203ENST00000393504 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
CNGA3-203ENST00000393504 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
CNGA3-203ENST00000393504 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
CNGA3-203ENST00000393504 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
CNGA3-203ENST00000393504 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
CNGA3-203ENST00000393504 ZEB1P37275 1124 aaPredicted RBP18.95■□□□□ 0.62
CNGA3-203ENST00000393504 CUX2O14529 1486 aa18.92■□□□□ 0.62
CNGA3-203ENST00000393504 CLIP1P30622 1438 aa18.89■□□□□ 0.62
CNGA3-203ENST00000393504 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.62
CNGA3-203ENST00000393504 KIF21BO75037 1637 aa18.87■□□□□ 0.61
CNGA3-203ENST00000393504 APLP2Q06481 763 aa18.86■□□□□ 0.61
CNGA3-203ENST00000393504 PRDM2Q13029 1718 aa18.85■□□□□ 0.61
CNGA3-203ENST00000393504 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
CNGA3-203ENST00000393504 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
CNGA3-203ENST00000393504 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
CNGA3-203ENST00000393504 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
CNGA3-203ENST00000393504 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
CNGA3-203ENST00000393504 IGF1RP08069 1367 aa18.77■□□□□ 0.6
CNGA3-203ENST00000393504 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
CNGA3-203ENST00000393504 DNMBPQ6XZF7 1577 aa18.73■□□□□ 0.59
CNGA3-203ENST00000393504 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
CNGA3-203ENST00000393504 CENPBP07199 599 aaPredicted RBP18.72■□□□□ 0.59
CNGA3-203ENST00000393504 CCER1Q8TC90 406 aaPredicted RBP18.72■□□□□ 0.59
CNGA3-203ENST00000393504 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
CNGA3-203ENST00000393504 URB2Q14146 1524 aaKnown RBP18.69■□□□□ 0.58
CNGA3-203ENST00000393504 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CNGA3-203ENST00000393504 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
CNGA3-203ENST00000393504 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
CNGA3-203ENST00000393504 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
CNGA3-203ENST00000393504 P3H3Q8IVL6 736 aa18.67■□□□□ 0.58
CNGA3-203ENST00000393504 MYT1Q01538 1121 aa18.65■□□□□ 0.58
CNGA3-203ENST00000393504 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
CNGA3-203ENST00000393504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
CNGA3-203ENST00000393504 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
CNGA3-203ENST00000393504 KIF21AQ7Z4S6 1674 aa18.59■□□□□ 0.57
CNGA3-203ENST00000393504 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
CNGA3-203ENST00000393504 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
CNGA3-203ENST00000393504 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
CNGA3-203ENST00000393504 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms