RNA–Protein interactions for RNA: ENST00000281589.4

PABPC3-201, Transcript of poly(A) binding protein cytoplasmic 3, humanhuman

APPRIS P1 BASIC

Gene PABPC3, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC3-201ENST00000281589 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
PABPC3-201ENST00000281589 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
PABPC3-201ENST00000281589 MYT1Q01538 1121 aa16.06■□□□□ 0.16
PABPC3-201ENST00000281589 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
PABPC3-201ENST00000281589 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
PABPC3-201ENST00000281589 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
PABPC3-201ENST00000281589 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
PABPC3-201ENST00000281589 HRCP23327 699 aa15.33■□□□□ 0.04
PABPC3-201ENST00000281589 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
PABPC3-201ENST00000281589 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
PABPC3-201ENST00000281589 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
PABPC3-201ENST00000281589 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
PABPC3-201ENST00000281589 PPARGC1BQ86YN6 1023 aaKnown RBP15.03■□□□□ -0
PABPC3-201ENST00000281589 BCL11AQ9H165 835 aa15.03■□□□□ -0
PABPC3-201ENST00000281589 APLP2Q06481 763 aa14.93□□□□□ -0.02
PABPC3-201ENST00000281589 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
PABPC3-201ENST00000281589 ERICH6Q7L0X2 663 aa14.84□□□□□ -0.03
PABPC3-201ENST00000281589 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
PABPC3-201ENST00000281589 MYO15BQ96JP2 1530 aa14.64□□□□□ -0.07
PABPC3-201ENST00000281589 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
PABPC3-201ENST00000281589 DCAF1Q9Y4B6 1507 aa14.57□□□□□ -0.08
PABPC3-201ENST00000281589 CENPBP07199 599 aaPredicted RBP14.46□□□□□ -0.1
PABPC3-201ENST00000281589 ABCC9O60706 1549 aa14.45□□□□□ -0.1
PABPC3-201ENST00000281589 PCGF6Q9BYE7 350 aa14.45□□□□□ -0.1
PABPC3-201ENST00000281589 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
PABPC3-201ENST00000281589 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
PABPC3-201ENST00000281589 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
PABPC3-201ENST00000281589 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
PABPC3-201ENST00000281589 LOC105371045A0A1W2PR82 267 aa14.28□□□□□ -0.12
PABPC3-201ENST00000281589 EHMT2Q96KQ7 1210 aa14.23□□□□□ -0.13
PABPC3-201ENST00000281589 ANP32EQ9BTT0 268 aa14.21□□□□□ -0.13
PABPC3-201ENST00000281589 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
PABPC3-201ENST00000281589 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
PABPC3-201ENST00000281589 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
PABPC3-201ENST00000281589 TRIM41Q8WV44 630 aa14.08□□□□□ -0.16
PABPC3-201ENST00000281589 CECR2Q9BXF3 1484 aa14.06□□□□□ -0.16
PABPC3-201ENST00000281589 EIF5BO60841 1220 aaKnown RBP14.04□□□□□ -0.16
PABPC3-201ENST00000281589 RB1CC1Q8TDY2 1594 aa14.04□□□□□ -0.16
PABPC3-201ENST00000281589 NACADO15069 1562 aa14□□□□□ -0.17
PABPC3-201ENST00000281589 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
PABPC3-201ENST00000281589 ZEB1P37275 1124 aaPredicted RBP13.97□□□□□ -0.17
PABPC3-201ENST00000281589 TRIM26Q12899 539 aaPredicted RBP13.95□□□□□ -0.18
PABPC3-201ENST00000281589 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
PABPC3-201ENST00000281589 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
PABPC3-201ENST00000281589 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
PABPC3-201ENST00000281589 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
PABPC3-201ENST00000281589 WIZO95785 1651 aa13.85□□□□□ -0.19
PABPC3-201ENST00000281589 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
PABPC3-201ENST00000281589 SALL2Q9Y467 1007 aaPredicted RBP13.67□□□□□ -0.22
PABPC3-201ENST00000281589 TSHZ2Q9NRE2 1034 aa13.66□□□□□ -0.22
PABPC3-201ENST00000281589 EIF4G1Q04637 1599 aaKnown RBP13.65□□□□□ -0.22
PABPC3-201ENST00000281589 CCDC136Q96JN2 1154 aa13.64□□□□□ -0.23
PABPC3-201ENST00000281589 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
PABPC3-201ENST00000281589 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
PABPC3-201ENST00000281589 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.23
PABPC3-201ENST00000281589 SMARCA4P51532 1647 aa13.58□□□□□ -0.24
PABPC3-201ENST00000281589 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.24
PABPC3-201ENST00000281589 UNC13AQ9UPW8 1703 aa13.58□□□□□ -0.24
PABPC3-201ENST00000281589 TOP2AP11388 1531 aaKnown RBP13.57□□□□□ -0.24
PABPC3-201ENST00000281589 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
PABPC3-201ENST00000281589 DIEXFQ68CQ4 756 aaKnown RBP13.51□□□□□ -0.25
PABPC3-201ENST00000281589 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
PABPC3-201ENST00000281589 RANGAP1P46060 587 aaPredicted RBP13.49□□□□□ -0.25
PABPC3-201ENST00000281589 BICRAQ9NZM4 1560 aa13.47□□□□□ -0.25
PABPC3-201ENST00000281589 SOGA1O94964 1423 aa13.47□□□□□ -0.25
PABPC3-201ENST00000281589 YTHDC1Q96MU7 727 aaKnown RBP13.45□□□□□ -0.26
PABPC3-201ENST00000281589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
PABPC3-201ENST00000281589 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
PABPC3-201ENST00000281589 SUPT16HQ9Y5B9 1047 aaKnown RBP13.39□□□□□ -0.27
PABPC3-201ENST00000281589 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
PABPC3-201ENST00000281589 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
PABPC3-201ENST00000281589 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
PABPC3-201ENST00000281589 WRNQ14191 1432 aaPredicted RBP eCLIP13.36□□□□□ -0.27
PABPC3-201ENST00000281589 ERICH6BQ5W0A0 696 aa13.34□□□□□ -0.27
PABPC3-201ENST00000281589 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
PABPC3-201ENST00000281589 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
PABPC3-201ENST00000281589 ATAD2BQ9ULI0 1458 aa13.32□□□□□ -0.28
PABPC3-201ENST00000281589 EEA1Q15075 1411 aa13.3□□□□□ -0.28
PABPC3-201ENST00000281589 DEKP35659 375 aaKnown RBP13.3□□□□□ -0.28
PABPC3-201ENST00000281589 MSH5O43196 834 aa13.27□□□□□ -0.28
PABPC3-201ENST00000281589 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
PABPC3-201ENST00000281589 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
PABPC3-201ENST00000281589 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
PABPC3-201ENST00000281589 RBM19Q9Y4C8 960 aaKnown RBP13.2□□□□□ -0.3
PABPC3-201ENST00000281589 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
PABPC3-201ENST00000281589 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
PABPC3-201ENST00000281589 AEBP2Q6ZN18 517 aaPredicted RBP13.17□□□□□ -0.3
PABPC3-201ENST00000281589 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
PABPC3-201ENST00000281589 MYT1LQ9UL68 1186 aa13.17□□□□□ -0.3
PABPC3-201ENST00000281589 KIF21BO75037 1637 aa13.15□□□□□ -0.3
PABPC3-201ENST00000281589 IL27Q8NEV9 243 aa13.12□□□□□ -0.31
PABPC3-201ENST00000281589 CLIP1P30622 1438 aa13.11□□□□□ -0.31
PABPC3-201ENST00000281589 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
PABPC3-201ENST00000281589 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
PABPC3-201ENST00000281589 MIER1Q8N108 512 aa13.09□□□□□ -0.31
PABPC3-201ENST00000281589 NEFLP07196 543 aa13.08□□□□□ -0.32
PABPC3-201ENST00000281589 PDE4CQ08493 712 aa13.07□□□□□ -0.32
PABPC3-201ENST00000281589 VPS8Q8N3P4 1428 aa13.06□□□□□ -0.32
PABPC3-201ENST00000281589 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
PABPC3-201ENST00000281589 PDIA4P13667 645 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms