Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LRRC28Q86X40 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LRRC28Q86X40 AC117489.1-201ENST00000625169 3217 ntBASIC13.83□□□□□ -0.2
LRRC28Q86X40 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.82□□□□□ -0.2
LRRC28Q86X40 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 AC105233.2-201ENST00000523697 349 ntBASIC13.82□□□□□ -0.2
LRRC28Q86X40 AF228730.5-201ENST00000530288 346 ntBASIC13.82□□□□□ -0.2
LRRC28Q86X40 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 AC073389.1-201ENST00000595595 795 ntBASIC13.82□□□□□ -0.2
LRRC28Q86X40 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.82□□□□□ -0.2
LRRC28Q86X40 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LRRC28Q86X40 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LRRC28Q86X40 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.81□□□□□ -0.2
LRRC28Q86X40 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms