Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 KRT16P4-201ENST00000453883 522 ntBASIC12.91□□□□□ -0.34
ZNF546Q86UE3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 AC106795.1-205ENST00000512851 1056 ntBASIC12.91□□□□□ -0.34
ZNF546Q86UE3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZNF546Q86UE3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 AC015802.1-201ENST00000588104 1449 ntBASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MIR4321-201ENST00000592276 80 ntBASIC12.9□□□□□ -0.34
ZNF546Q86UE3 AC021097.1-201ENST00000607902 574 ntBASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 IER3-202ENST00000376377 1350 ntBASIC12.9□□□□□ -0.34
ZNF546Q86UE3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZNF546Q86UE3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms