RNA–Protein interactions for RNA: ENST00000547702.5

CNTN1-203, Transcript of contactin 1, humanhuman

TSL 2 BASIC

Gene CNTN1, Length 3,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-203ENST00000547702 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
CNTN1-203ENST00000547702 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
CNTN1-203ENST00000547702 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
CNTN1-203ENST00000547702 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
CNTN1-203ENST00000547702 HRCP23327 699 aa23.51■■□□□ 1.35
CNTN1-203ENST00000547702 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
CNTN1-203ENST00000547702 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
CNTN1-203ENST00000547702 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
CNTN1-203ENST00000547702 CCDC180Q9P1Z9 1646 aa23.39■■□□□ 1.34
CNTN1-203ENST00000547702 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
CNTN1-203ENST00000547702 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
CNTN1-203ENST00000547702 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
CNTN1-203ENST00000547702 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
CNTN1-203ENST00000547702 TRIM26Q12899 539 aaPredicted RBP22.71■■□□□ 1.23
CNTN1-203ENST00000547702 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
CNTN1-203ENST00000547702 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
CNTN1-203ENST00000547702 ABCC9O60706 1549 aa22.36■■□□□ 1.17
CNTN1-203ENST00000547702 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
CNTN1-203ENST00000547702 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
CNTN1-203ENST00000547702 SCRIBQ14160 1630 aa22.17■■□□□ 1.14
CNTN1-203ENST00000547702 EHMT2Q96KQ7 1210 aa22.17■■□□□ 1.14
CNTN1-203ENST00000547702 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
CNTN1-203ENST00000547702 PELP1Q8IZL8 1130 aaKnown RBP22.05■■□□□ 1.12
CNTN1-203ENST00000547702 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
CNTN1-203ENST00000547702 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
CNTN1-203ENST00000547702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
CNTN1-203ENST00000547702 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
CNTN1-203ENST00000547702 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
CNTN1-203ENST00000547702 WIZO95785 1651 aa21.62■■□□□ 1.05
CNTN1-203ENST00000547702 NACADO15069 1562 aa21.62■■□□□ 1.05
CNTN1-203ENST00000547702 ACIN1Q9UKV3 1341 aaKnown RBP21.61■■□□□ 1.05
CNTN1-203ENST00000547702 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
CNTN1-203ENST00000547702 DIEXFQ68CQ4 756 aaKnown RBP21.55■■□□□ 1.04
CNTN1-203ENST00000547702 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
CNTN1-203ENST00000547702 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
CNTN1-203ENST00000547702 BAZ1AQ9NRL2 1556 aaPredicted RBP21.47■■□□□ 1.03
CNTN1-203ENST00000547702 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
CNTN1-203ENST00000547702 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
CNTN1-203ENST00000547702 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
CNTN1-203ENST00000547702 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
CNTN1-203ENST00000547702 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
CNTN1-203ENST00000547702 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
CNTN1-203ENST00000547702 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
CNTN1-203ENST00000547702 PABPN1Q86U42 306 aaKnown RBP eCLIP21.29■■□□□ 1
CNTN1-203ENST00000547702 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
CNTN1-203ENST00000547702 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
CNTN1-203ENST00000547702 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
CNTN1-203ENST00000547702 SOGA1O94964 1423 aa21.25■□□□□ 0.99
CNTN1-203ENST00000547702 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
CNTN1-203ENST00000547702 EEA1Q15075 1411 aa21.18■□□□□ 0.98
CNTN1-203ENST00000547702 YTHDC1Q96MU7 727 aaKnown RBP21.16■□□□□ 0.98
CNTN1-203ENST00000547702 SMARCA2P51531 1590 aa21.15■□□□□ 0.98
CNTN1-203ENST00000547702 SMARCA4P51532 1647 aa21.13■□□□□ 0.97
CNTN1-203ENST00000547702 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
CNTN1-203ENST00000547702 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
CNTN1-203ENST00000547702 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
CNTN1-203ENST00000547702 MYT1Q01538 1121 aa21.08■□□□□ 0.96
CNTN1-203ENST00000547702 MIER1Q8N108 512 aa20.99■□□□□ 0.95
CNTN1-203ENST00000547702 APLP2Q06481 763 aa20.99■□□□□ 0.95
CNTN1-203ENST00000547702 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
CNTN1-203ENST00000547702 CLIP1P30622 1438 aa20.9■□□□□ 0.94
CNTN1-203ENST00000547702 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
CNTN1-203ENST00000547702 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
CNTN1-203ENST00000547702 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
CNTN1-203ENST00000547702 KIF21BO75037 1637 aa20.79■□□□□ 0.92
CNTN1-203ENST00000547702 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
CNTN1-203ENST00000547702 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
CNTN1-203ENST00000547702 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
CNTN1-203ENST00000547702 CLSPNQ9HAW4 1339 aa20.64■□□□□ 0.89
CNTN1-203ENST00000547702 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
CNTN1-203ENST00000547702 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
CNTN1-203ENST00000547702 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
CNTN1-203ENST00000547702 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
CNTN1-203ENST00000547702 KANK4Q5T7N3 995 aaPredicted RBP20.48■□□□□ 0.87
CNTN1-203ENST00000547702 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
CNTN1-203ENST00000547702 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
CNTN1-203ENST00000547702 ITGAEP38570 1179 aa20.42■□□□□ 0.86
CNTN1-203ENST00000547702 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
CNTN1-203ENST00000547702 ERICH3Q5RHP9 1530 aa20.4■□□□□ 0.86
CNTN1-203ENST00000547702 PRXQ9BXM0 1461 aa20.38■□□□□ 0.85
CNTN1-203ENST00000547702 RRBP1Q9P2E9 1410 aaKnown RBP20.35■□□□□ 0.85
CNTN1-203ENST00000547702 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
CNTN1-203ENST00000547702 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
CNTN1-203ENST00000547702 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
CNTN1-203ENST00000547702 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
CNTN1-203ENST00000547702 CUX2O14529 1486 aa20.24■□□□□ 0.83
CNTN1-203ENST00000547702 KCNH8Q96L42 1107 aa20.21■□□□□ 0.83
CNTN1-203ENST00000547702 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
CNTN1-203ENST00000547702 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
CNTN1-203ENST00000547702 ARHGAP35Q9NRY4 1499 aa20.19■□□□□ 0.82
CNTN1-203ENST00000547702 CUX1P39880 1505 aa20.17■□□□□ 0.82
CNTN1-203ENST00000547702 BCANQ96GW7 911 aa20.17■□□□□ 0.82
CNTN1-203ENST00000547702 DDX10Q13206 875 aaKnown RBP20.16■□□□□ 0.82
CNTN1-203ENST00000547702 FAM50AQ14320 339 aaKnown RBP20.12■□□□□ 0.81
CNTN1-203ENST00000547702 FKBP8Q14318 412 aa20.11■□□□□ 0.81
CNTN1-203ENST00000547702 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
CNTN1-203ENST00000547702 ANP32EQ9BTT0 268 aa20.1■□□□□ 0.81
CNTN1-203ENST00000547702 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
CNTN1-203ENST00000547702 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
CNTN1-203ENST00000547702 NEFLP07196 543 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms