Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 FO393414.2-201ENST00000405153 598 ntBASIC18.42■□□□□ 0.54
DDX11Q96FC9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX11Q96FC9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX11Q96FC9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 HILS1-202ENST00000545329 423 ntBASIC18.41■□□□□ 0.54
DDX11Q96FC9 AC123567.1-201ENST00000548294 1261 ntBASIC18.41■□□□□ 0.54
DDX11Q96FC9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX11Q96FC9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX11Q96FC9 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX11Q96FC9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX11Q96FC9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms