Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 ZSCAN30-202ENST00000420878 4323 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 PIK3CD-201ENST00000361110 3508 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 AC124283.5-201ENST00000624661 1809 ntBASIC10.24□□□□□ -0.77
PCP4P48539 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 OACYLP-201ENST00000417918 2208 ntBASIC10.24□□□□□ -0.77
PCP4P48539 AP002490.2-201ENST00000524791 560 ntBASIC10.24□□□□□ -0.77
PCP4P48539 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 PLIN5-206ENST00000592610 1903 ntBASIC10.24□□□□□ -0.77
PCP4P48539 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
PCP4P48539 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 COX19-201ENST00000344111 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
PCP4P48539 ZNF559-213ENST00000603380 3054 ntAPPRIS P3 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 C3orf67-206ENST00000472469 4108 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 CNBD2-204ENST00000489667 2531 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 MSRB3-201ENST00000308259 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
PCP4P48539 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC10.23□□□□□ -0.77
PCP4P48539 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 INMT-MINDY4-202ENST00000458257 2877 ntAPPRIS P5 TSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 SNCG-201ENST00000348795 684 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 TFPT-201ENST00000391757 774 ntTSL 5 BASIC10.23□□□□□ -0.77
PCP4P48539 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC10.23□□□□□ -0.77
PCP4P48539 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 OR2I1P-208ENST00000641137 4948 ntBASIC10.23□□□□□ -0.77
PCP4P48539 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
PCP4P48539 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.23□□□□□ -0.77
PCP4P48539 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
PCP4P48539 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC10.23□□□□□ -0.77
PCP4P48539 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms