RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
PRAMEF9-201ENST00000415919 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
PRAMEF9-201ENST00000415919 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
PRAMEF9-201ENST00000415919 ABCC9O60706 1549 aa23.97■■□□□ 1.43
PRAMEF9-201ENST00000415919 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
PRAMEF9-201ENST00000415919 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
PRAMEF9-201ENST00000415919 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
PRAMEF9-201ENST00000415919 NACADO15069 1562 aa23.45■■□□□ 1.34
PRAMEF9-201ENST00000415919 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
PRAMEF9-201ENST00000415919 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
PRAMEF9-201ENST00000415919 SCRIBQ14160 1630 aa23.1■■□□□ 1.29
PRAMEF9-201ENST00000415919 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
PRAMEF9-201ENST00000415919 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
PRAMEF9-201ENST00000415919 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
PRAMEF9-201ENST00000415919 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
PRAMEF9-201ENST00000415919 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
PRAMEF9-201ENST00000415919 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
PRAMEF9-201ENST00000415919 BAZ1AQ9NRL2 1556 aaPredicted RBP22.2■■□□□ 1.14
PRAMEF9-201ENST00000415919 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
PRAMEF9-201ENST00000415919 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
PRAMEF9-201ENST00000415919 WIZO95785 1651 aa21.99■■□□□ 1.11
PRAMEF9-201ENST00000415919 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
PRAMEF9-201ENST00000415919 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
PRAMEF9-201ENST00000415919 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
PRAMEF9-201ENST00000415919 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
PRAMEF9-201ENST00000415919 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
PRAMEF9-201ENST00000415919 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
PRAMEF9-201ENST00000415919 CC2D2AQ9P2K1 1620 aa21.65■■□□□ 1.06
PRAMEF9-201ENST00000415919 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
PRAMEF9-201ENST00000415919 HMGXB3Q12766 1538 aa21.58■■□□□ 1.05
PRAMEF9-201ENST00000415919 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
PRAMEF9-201ENST00000415919 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
PRAMEF9-201ENST00000415919 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
PRAMEF9-201ENST00000415919 CFTRP13569 1480 aa21.11■□□□□ 0.97
PRAMEF9-201ENST00000415919 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
PRAMEF9-201ENST00000415919 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
PRAMEF9-201ENST00000415919 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
PRAMEF9-201ENST00000415919 NESP48681 1621 aa20.96■□□□□ 0.95
PRAMEF9-201ENST00000415919 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
PRAMEF9-201ENST00000415919 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
PRAMEF9-201ENST00000415919 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
PRAMEF9-201ENST00000415919 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
PRAMEF9-201ENST00000415919 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.92
PRAMEF9-201ENST00000415919 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
PRAMEF9-201ENST00000415919 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
PRAMEF9-201ENST00000415919 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
PRAMEF9-201ENST00000415919 CUX1P39880 1505 aa20.75■□□□□ 0.91
PRAMEF9-201ENST00000415919 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
PRAMEF9-201ENST00000415919 FAM9AQ8IZU1 332 aaPredicted RBP20.72■□□□□ 0.91
PRAMEF9-201ENST00000415919 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
PRAMEF9-201ENST00000415919 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
PRAMEF9-201ENST00000415919 SOGA1O94964 1423 aa20.62■□□□□ 0.89
PRAMEF9-201ENST00000415919 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
PRAMEF9-201ENST00000415919 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
PRAMEF9-201ENST00000415919 URB2Q14146 1524 aaKnown RBP20.59■□□□□ 0.89
PRAMEF9-201ENST00000415919 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
PRAMEF9-201ENST00000415919 EEA1Q15075 1411 aa20.55■□□□□ 0.88
PRAMEF9-201ENST00000415919 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
PRAMEF9-201ENST00000415919 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
PRAMEF9-201ENST00000415919 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
PRAMEF9-201ENST00000415919 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
PRAMEF9-201ENST00000415919 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
PRAMEF9-201ENST00000415919 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
PRAMEF9-201ENST00000415919 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
PRAMEF9-201ENST00000415919 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
PRAMEF9-201ENST00000415919 CUX2O14529 1486 aa20.43■□□□□ 0.86
PRAMEF9-201ENST00000415919 WDR62O43379 1518 aa20.41■□□□□ 0.86
PRAMEF9-201ENST00000415919 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
PRAMEF9-201ENST00000415919 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
PRAMEF9-201ENST00000415919 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
PRAMEF9-201ENST00000415919 WDR97A6NE52 1622 aa20.28■□□□□ 0.84
PRAMEF9-201ENST00000415919 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
PRAMEF9-201ENST00000415919 IFT140Q96RY7 1462 aa20.27■□□□□ 0.83
PRAMEF9-201ENST00000415919 IGF1RP08069 1367 aa20.27■□□□□ 0.83
PRAMEF9-201ENST00000415919 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
PRAMEF9-201ENST00000415919 KIF21BO75037 1637 aa20.25■□□□□ 0.83
PRAMEF9-201ENST00000415919 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
PRAMEF9-201ENST00000415919 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
PRAMEF9-201ENST00000415919 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
PRAMEF9-201ENST00000415919 RAPGEF2Q9Y4G8 1499 aa20.2■□□□□ 0.82
PRAMEF9-201ENST00000415919 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
PRAMEF9-201ENST00000415919 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
PRAMEF9-201ENST00000415919 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
PRAMEF9-201ENST00000415919 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
PRAMEF9-201ENST00000415919 TNIKQ9UKE5 1360 aa20.16■□□□□ 0.82
PRAMEF9-201ENST00000415919 ZNF608Q9ULD9 1512 aaPredicted RBP20.15■□□□□ 0.82
PRAMEF9-201ENST00000415919 CUL7Q14999 1698 aa20.1■□□□□ 0.81
PRAMEF9-201ENST00000415919 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
PRAMEF9-201ENST00000415919 PBRM1Q86U86 1689 aa20.08■□□□□ 0.8
PRAMEF9-201ENST00000415919 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
PRAMEF9-201ENST00000415919 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
PRAMEF9-201ENST00000415919 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
PRAMEF9-201ENST00000415919 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
PRAMEF9-201ENST00000415919 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
PRAMEF9-201ENST00000415919 ADAMTS12P58397 1594 aa19.96■□□□□ 0.79
PRAMEF9-201ENST00000415919 CLIP1P30622 1438 aa19.94■□□□□ 0.78
PRAMEF9-201ENST00000415919 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
PRAMEF9-201ENST00000415919 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
PRAMEF9-201ENST00000415919 FBLN2P98095 1184 aa19.87■□□□□ 0.77
PRAMEF9-201ENST00000415919 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms