RNA–Protein interactions for RNA: ENST00000552438.5

ASIC1-208, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 1 (best) BASIC

Gene ASIC1, Length 3,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-208ENST00000552438 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
ASIC1-208ENST00000552438 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
ASIC1-208ENST00000552438 ABCC9O60706 1549 aa19.24■□□□□ 0.67
ASIC1-208ENST00000552438 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
ASIC1-208ENST00000552438 DCAF8L2P0C7V8 631 aa19■□□□□ 0.63
ASIC1-208ENST00000552438 PELP1Q8IZL8 1130 aaKnown RBP18.8■□□□□ 0.6
ASIC1-208ENST00000552438 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
ASIC1-208ENST00000552438 HRCP23327 699 aa18.76■□□□□ 0.59
ASIC1-208ENST00000552438 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
ASIC1-208ENST00000552438 NACADO15069 1562 aa18.69■□□□□ 0.58
ASIC1-208ENST00000552438 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
ASIC1-208ENST00000552438 PPARGC1BQ86YN6 1023 aaKnown RBP18.36■□□□□ 0.53
ASIC1-208ENST00000552438 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
ASIC1-208ENST00000552438 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
ASIC1-208ENST00000552438 PCGF6Q9BYE7 350 aa18.27■□□□□ 0.52
ASIC1-208ENST00000552438 MYT1Q01538 1121 aa18.22■□□□□ 0.51
ASIC1-208ENST00000552438 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.49
ASIC1-208ENST00000552438 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
ASIC1-208ENST00000552438 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
ASIC1-208ENST00000552438 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
ASIC1-208ENST00000552438 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
ASIC1-208ENST00000552438 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
ASIC1-208ENST00000552438 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
ASIC1-208ENST00000552438 ZEB1P37275 1124 aaPredicted RBP17.57■□□□□ 0.4
ASIC1-208ENST00000552438 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
ASIC1-208ENST00000552438 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
ASIC1-208ENST00000552438 TRIM26Q12899 539 aaPredicted RBP17.54■□□□□ 0.4
ASIC1-208ENST00000552438 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
ASIC1-208ENST00000552438 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.39
ASIC1-208ENST00000552438 SMARCA4P51532 1647 aa17.52■□□□□ 0.39
ASIC1-208ENST00000552438 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
ASIC1-208ENST00000552438 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
ASIC1-208ENST00000552438 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
ASIC1-208ENST00000552438 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
ASIC1-208ENST00000552438 WIZO95785 1651 aa17.35■□□□□ 0.37
ASIC1-208ENST00000552438 NEUROD1Q13562 356 aa17.35■□□□□ 0.37
ASIC1-208ENST00000552438 SMARCA2P51531 1590 aa17.32■□□□□ 0.36
ASIC1-208ENST00000552438 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
ASIC1-208ENST00000552438 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
ASIC1-208ENST00000552438 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
ASIC1-208ENST00000552438 CENPBP07199 599 aaPredicted RBP17.28■□□□□ 0.36
ASIC1-208ENST00000552438 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
ASIC1-208ENST00000552438 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
ASIC1-208ENST00000552438 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
ASIC1-208ENST00000552438 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
ASIC1-208ENST00000552438 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
ASIC1-208ENST00000552438 CCDC88BA6NC98 1476 aa17.03■□□□□ 0.32
ASIC1-208ENST00000552438 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
ASIC1-208ENST00000552438 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
ASIC1-208ENST00000552438 CADPSQ9ULU8 1353 aa16.83■□□□□ 0.28
ASIC1-208ENST00000552438 CCER1Q8TC90 406 aaPredicted RBP16.83■□□□□ 0.28
ASIC1-208ENST00000552438 YTHDC1Q96MU7 727 aaKnown RBP16.81■□□□□ 0.28
ASIC1-208ENST00000552438 CFTRP13569 1480 aa16.79■□□□□ 0.28
ASIC1-208ENST00000552438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
ASIC1-208ENST00000552438 NESP48681 1621 aa16.77■□□□□ 0.27
ASIC1-208ENST00000552438 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
ASIC1-208ENST00000552438 LAMC3Q9Y6N6 1575 aa16.71■□□□□ 0.27
ASIC1-208ENST00000552438 ANP32EQ9BTT0 268 aa16.68■□□□□ 0.26
ASIC1-208ENST00000552438 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
ASIC1-208ENST00000552438 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
ASIC1-208ENST00000552438 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
ASIC1-208ENST00000552438 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
ASIC1-208ENST00000552438 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
ASIC1-208ENST00000552438 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
ASIC1-208ENST00000552438 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
ASIC1-208ENST00000552438 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
ASIC1-208ENST00000552438 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
ASIC1-208ENST00000552438 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
ASIC1-208ENST00000552438 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
ASIC1-208ENST00000552438 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
ASIC1-208ENST00000552438 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
ASIC1-208ENST00000552438 MIER1Q8N108 512 aa16.45■□□□□ 0.22
ASIC1-208ENST00000552438 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
ASIC1-208ENST00000552438 CUX1P39880 1505 aa16.42■□□□□ 0.22
ASIC1-208ENST00000552438 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
ASIC1-208ENST00000552438 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
ASIC1-208ENST00000552438 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
ASIC1-208ENST00000552438 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
ASIC1-208ENST00000552438 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
ASIC1-208ENST00000552438 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
ASIC1-208ENST00000552438 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
ASIC1-208ENST00000552438 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
ASIC1-208ENST00000552438 THOC2Q8NI27 1593 aaKnown RBP16.33■□□□□ 0.2
ASIC1-208ENST00000552438 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.2
ASIC1-208ENST00000552438 WDR62O43379 1518 aa16.32■□□□□ 0.2
ASIC1-208ENST00000552438 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
ASIC1-208ENST00000552438 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
ASIC1-208ENST00000552438 SOGA1O94964 1423 aa16.26■□□□□ 0.19
ASIC1-208ENST00000552438 ERICH6Q7L0X2 663 aa16.25■□□□□ 0.19
ASIC1-208ENST00000552438 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
ASIC1-208ENST00000552438 CUX2O14529 1486 aa16.22■□□□□ 0.19
ASIC1-208ENST00000552438 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
ASIC1-208ENST00000552438 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
ASIC1-208ENST00000552438 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
ASIC1-208ENST00000552438 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
ASIC1-208ENST00000552438 RUSC2Q8N2Y8 1516 aa16.13■□□□□ 0.17
ASIC1-208ENST00000552438 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
ASIC1-208ENST00000552438 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
ASIC1-208ENST00000552438 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.17
ASIC1-208ENST00000552438 BCANQ96GW7 911 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms