RNA–Protein interactions for RNA: ENST00000416524.2

IFT172-203, Transcript of intraflagellar transport 172, humanhuman

TSL 2 BASIC

Gene IFT172, Length 1,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-203ENST00000416524 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
IFT172-203ENST00000416524 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
IFT172-203ENST00000416524 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
IFT172-203ENST00000416524 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
IFT172-203ENST00000416524 SUPT5HO00267 1087 aaKnown RBP23.58■■□□□ 1.36
IFT172-203ENST00000416524 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
IFT172-203ENST00000416524 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
IFT172-203ENST00000416524 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
IFT172-203ENST00000416524 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
IFT172-203ENST00000416524 ABCC9O60706 1549 aa22.73■■□□□ 1.23
IFT172-203ENST00000416524 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
IFT172-203ENST00000416524 NACADO15069 1562 aa22.48■■□□□ 1.19
IFT172-203ENST00000416524 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
IFT172-203ENST00000416524 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
IFT172-203ENST00000416524 HRCP23327 699 aa22.22■■□□□ 1.15
IFT172-203ENST00000416524 LOC105371045A0A1W2PR82 267 aa22.21■■□□□ 1.15
IFT172-203ENST00000416524 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
IFT172-203ENST00000416524 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
IFT172-203ENST00000416524 MROH2BQ7Z745 1585 aa22.08■■□□□ 1.13
IFT172-203ENST00000416524 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
IFT172-203ENST00000416524 WIZO95785 1651 aa21.97■■□□□ 1.11
IFT172-203ENST00000416524 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
IFT172-203ENST00000416524 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
IFT172-203ENST00000416524 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
IFT172-203ENST00000416524 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
IFT172-203ENST00000416524 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
IFT172-203ENST00000416524 SMARCA4P51532 1647 aa21.7■■□□□ 1.07
IFT172-203ENST00000416524 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
IFT172-203ENST00000416524 PPARGC1BQ86YN6 1023 aaKnown RBP21.62■■□□□ 1.05
IFT172-203ENST00000416524 CCDC88BA6NC98 1476 aa21.55■■□□□ 1.04
IFT172-203ENST00000416524 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
IFT172-203ENST00000416524 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
IFT172-203ENST00000416524 ZEB1P37275 1124 aaPredicted RBP21.45■■□□□ 1.02
IFT172-203ENST00000416524 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
IFT172-203ENST00000416524 ABCC8Q09428 1581 aa21.42■■□□□ 1.02
IFT172-203ENST00000416524 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
IFT172-203ENST00000416524 PABPN1Q86U42 306 aaKnown RBP eCLIP21.33■■□□□ 1.01
IFT172-203ENST00000416524 EEA1Q15075 1411 aa21.26■□□□□ 0.99
IFT172-203ENST00000416524 SOGA1O94964 1423 aa21.21■□□□□ 0.99
IFT172-203ENST00000416524 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
IFT172-203ENST00000416524 TNIKQ9UKE5 1360 aa21.16■□□□□ 0.98
IFT172-203ENST00000416524 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
IFT172-203ENST00000416524 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
IFT172-203ENST00000416524 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
IFT172-203ENST00000416524 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.97
IFT172-203ENST00000416524 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.96
IFT172-203ENST00000416524 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
IFT172-203ENST00000416524 SYNJ1O43426 1573 aa21.01■□□□□ 0.95
IFT172-203ENST00000416524 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
IFT172-203ENST00000416524 KIF21BO75037 1637 aa20.94■□□□□ 0.94
IFT172-203ENST00000416524 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
IFT172-203ENST00000416524 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
IFT172-203ENST00000416524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.89■□□□□ 0.93
IFT172-203ENST00000416524 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
IFT172-203ENST00000416524 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
IFT172-203ENST00000416524 HMGXB3Q12766 1538 aa20.79■□□□□ 0.92
IFT172-203ENST00000416524 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.92
IFT172-203ENST00000416524 CLIP1P30622 1438 aa20.77■□□□□ 0.91
IFT172-203ENST00000416524 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
IFT172-203ENST00000416524 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
IFT172-203ENST00000416524 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
IFT172-203ENST00000416524 ERICH3Q5RHP9 1530 aa20.62■□□□□ 0.89
IFT172-203ENST00000416524 APLP2Q06481 763 aa20.58■□□□□ 0.89
IFT172-203ENST00000416524 PRXQ9BXM0 1461 aa20.58■□□□□ 0.89
IFT172-203ENST00000416524 CUX1P39880 1505 aa20.57■□□□□ 0.88
IFT172-203ENST00000416524 CFTRP13569 1480 aa20.57■□□□□ 0.88
IFT172-203ENST00000416524 KIF27Q86VH2 1401 aa20.51■□□□□ 0.87
IFT172-203ENST00000416524 PRDM2Q13029 1718 aa20.49■□□□□ 0.87
IFT172-203ENST00000416524 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
IFT172-203ENST00000416524 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
IFT172-203ENST00000416524 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
IFT172-203ENST00000416524 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
IFT172-203ENST00000416524 SCAF1Q9H7N4 1312 aaKnown RBP20.38■□□□□ 0.85
IFT172-203ENST00000416524 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
IFT172-203ENST00000416524 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
IFT172-203ENST00000416524 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
IFT172-203ENST00000416524 CUX2O14529 1486 aa20.27■□□□□ 0.84
IFT172-203ENST00000416524 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.84
IFT172-203ENST00000416524 IGF1RP08069 1367 aa20.25■□□□□ 0.83
IFT172-203ENST00000416524 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
IFT172-203ENST00000416524 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
IFT172-203ENST00000416524 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
IFT172-203ENST00000416524 RRBP1Q9P2E9 1410 aaKnown RBP20.22■□□□□ 0.83
IFT172-203ENST00000416524 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
IFT172-203ENST00000416524 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
IFT172-203ENST00000416524 NEUROD1Q13562 356 aa20.19■□□□□ 0.82
IFT172-203ENST00000416524 CARMIL1Q5VZK9 1371 aa20.17■□□□□ 0.82
IFT172-203ENST00000416524 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
IFT172-203ENST00000416524 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
IFT172-203ENST00000416524 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
IFT172-203ENST00000416524 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
IFT172-203ENST00000416524 TIAM1Q13009 1591 aa20.08■□□□□ 0.8
IFT172-203ENST00000416524 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.8
IFT172-203ENST00000416524 PELP1Q8IZL8 1130 aaKnown RBP20.05■□□□□ 0.8
IFT172-203ENST00000416524 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
IFT172-203ENST00000416524 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
IFT172-203ENST00000416524 TOPBP1Q92547 1522 aa20■□□□□ 0.79
IFT172-203ENST00000416524 MIER1Q8N108 512 aa20■□□□□ 0.79
IFT172-203ENST00000416524 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
IFT172-203ENST00000416524 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms