RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
CTCFL-202ENST00000371196 HRCP23327 699 aa19.71■□□□□ 0.75
CTCFL-202ENST00000371196 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.68
CTCFL-202ENST00000371196 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.67
CTCFL-202ENST00000371196 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
CTCFL-202ENST00000371196 PPARGC1BQ86YN6 1023 aaKnown RBP19.25■□□□□ 0.67
CTCFL-202ENST00000371196 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
CTCFL-202ENST00000371196 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
CTCFL-202ENST00000371196 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
CTCFL-202ENST00000371196 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
CTCFL-202ENST00000371196 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
CTCFL-202ENST00000371196 TRIM26Q12899 539 aaPredicted RBP18.65■□□□□ 0.58
CTCFL-202ENST00000371196 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
CTCFL-202ENST00000371196 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
CTCFL-202ENST00000371196 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
CTCFL-202ENST00000371196 ZCCHC6Q5VYS8 1495 aaKnown RBP18.53■□□□□ 0.56
CTCFL-202ENST00000371196 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
CTCFL-202ENST00000371196 MYT1Q01538 1121 aa18.46■□□□□ 0.55
CTCFL-202ENST00000371196 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
CTCFL-202ENST00000371196 NEUROD1Q13562 356 aa18.14■□□□□ 0.49
CTCFL-202ENST00000371196 ABCC9O60706 1549 aa18.12■□□□□ 0.49
CTCFL-202ENST00000371196 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
CTCFL-202ENST00000371196 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
CTCFL-202ENST00000371196 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
CTCFL-202ENST00000371196 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
CTCFL-202ENST00000371196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
CTCFL-202ENST00000371196 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
CTCFL-202ENST00000371196 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
CTCFL-202ENST00000371196 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
CTCFL-202ENST00000371196 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
CTCFL-202ENST00000371196 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
CTCFL-202ENST00000371196 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
CTCFL-202ENST00000371196 NACADO15069 1562 aa17.5■□□□□ 0.39
CTCFL-202ENST00000371196 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
CTCFL-202ENST00000371196 SCRIBQ14160 1630 aa17.45■□□□□ 0.38
CTCFL-202ENST00000371196 MIER1Q8N108 512 aa17.39■□□□□ 0.37
CTCFL-202ENST00000371196 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
CTCFL-202ENST00000371196 WRNQ14191 1432 aaPredicted RBP eCLIP17.26■□□□□ 0.35
CTCFL-202ENST00000371196 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
CTCFL-202ENST00000371196 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
CTCFL-202ENST00000371196 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
CTCFL-202ENST00000371196 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
CTCFL-202ENST00000371196 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
CTCFL-202ENST00000371196 CEP162Q5TB80 1403 aa17.12■□□□□ 0.33
CTCFL-202ENST00000371196 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
CTCFL-202ENST00000371196 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
CTCFL-202ENST00000371196 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
CTCFL-202ENST00000371196 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
CTCFL-202ENST00000371196 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
CTCFL-202ENST00000371196 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
CTCFL-202ENST00000371196 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
CTCFL-202ENST00000371196 WIZO95785 1651 aa16.95■□□□□ 0.3
CTCFL-202ENST00000371196 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
CTCFL-202ENST00000371196 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
CTCFL-202ENST00000371196 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
CTCFL-202ENST00000371196 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
CTCFL-202ENST00000371196 SOGA1O94964 1423 aa16.87■□□□□ 0.29
CTCFL-202ENST00000371196 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-202ENST00000371196 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
CTCFL-202ENST00000371196 EEA1Q15075 1411 aa16.81■□□□□ 0.28
CTCFL-202ENST00000371196 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
CTCFL-202ENST00000371196 BCANQ96GW7 911 aa16.76■□□□□ 0.27
CTCFL-202ENST00000371196 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
CTCFL-202ENST00000371196 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
CTCFL-202ENST00000371196 FKBP8Q14318 412 aa16.71■□□□□ 0.26
CTCFL-202ENST00000371196 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
CTCFL-202ENST00000371196 APLP2Q06481 763 aa16.69■□□□□ 0.26
CTCFL-202ENST00000371196 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
CTCFL-202ENST00000371196 VPS8Q8N3P4 1428 aa16.65■□□□□ 0.26
CTCFL-202ENST00000371196 CLIP1P30622 1438 aa16.65■□□□□ 0.26
CTCFL-202ENST00000371196 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
CTCFL-202ENST00000371196 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
CTCFL-202ENST00000371196 SMARCA2P51531 1590 aa16.58■□□□□ 0.25
CTCFL-202ENST00000371196 NEFLP07196 543 aa16.58■□□□□ 0.24
CTCFL-202ENST00000371196 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
CTCFL-202ENST00000371196 MSH5O43196 834 aa16.56■□□□□ 0.24
CTCFL-202ENST00000371196 KIF21BO75037 1637 aa16.54■□□□□ 0.24
CTCFL-202ENST00000371196 ITGAEP38570 1179 aa16.52■□□□□ 0.23
CTCFL-202ENST00000371196 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
CTCFL-202ENST00000371196 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
CTCFL-202ENST00000371196 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.22
CTCFL-202ENST00000371196 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
CTCFL-202ENST00000371196 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
CTCFL-202ENST00000371196 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
CTCFL-202ENST00000371196 RAPGEF2Q9Y4G8 1499 aa16.41■□□□□ 0.22
CTCFL-202ENST00000371196 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
CTCFL-202ENST00000371196 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
CTCFL-202ENST00000371196 CUX2O14529 1486 aa16.38■□□□□ 0.21
CTCFL-202ENST00000371196 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
CTCFL-202ENST00000371196 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
CTCFL-202ENST00000371196 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
CTCFL-202ENST00000371196 CCER2I3L3R5 266 aa16.35■□□□□ 0.21
CTCFL-202ENST00000371196 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
CTCFL-202ENST00000371196 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
CTCFL-202ENST00000371196 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
CTCFL-202ENST00000371196 ANP32CO43423 234 aa16.3■□□□□ 0.2
CTCFL-202ENST00000371196 DEKP35659 375 aaKnown RBP16.3■□□□□ 0.2
CTCFL-202ENST00000371196 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
CTCFL-202ENST00000371196 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
CTCFL-202ENST00000371196 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms