RNA–Protein interactions for RNA: ENST00000397176.6

PRKCQ-202, Transcript of protein kinase C theta, humanhuman

TSL 5 BASIC

Gene PRKCQ, Length 3,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-202ENST00000397176 NISCHQ9Y2I1 1504 aa20.44■□□□□ 0.86
PRKCQ-202ENST00000397176 HRCP23327 699 aa19.28■□□□□ 0.68
PRKCQ-202ENST00000397176 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
PRKCQ-202ENST00000397176 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
PRKCQ-202ENST00000397176 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
PRKCQ-202ENST00000397176 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
PRKCQ-202ENST00000397176 SHROOM4Q9ULL8 1493 aa18.77■□□□□ 0.6
PRKCQ-202ENST00000397176 MYO15BQ96JP2 1530 aa18.53■□□□□ 0.56
PRKCQ-202ENST00000397176 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
PRKCQ-202ENST00000397176 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
PRKCQ-202ENST00000397176 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
PRKCQ-202ENST00000397176 MYT1Q01538 1121 aa18.1■□□□□ 0.49
PRKCQ-202ENST00000397176 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
PRKCQ-202ENST00000397176 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.48
PRKCQ-202ENST00000397176 ZEB1P37275 1124 aaPredicted RBP17.95■□□□□ 0.46
PRKCQ-202ENST00000397176 NEUROD1Q13562 356 aa17.88■□□□□ 0.45
PRKCQ-202ENST00000397176 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
PRKCQ-202ENST00000397176 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
PRKCQ-202ENST00000397176 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
PRKCQ-202ENST00000397176 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
PRKCQ-202ENST00000397176 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
PRKCQ-202ENST00000397176 EHMT2Q96KQ7 1210 aa17.58■□□□□ 0.4
PRKCQ-202ENST00000397176 DIEXFQ68CQ4 756 aaKnown RBP17.5■□□□□ 0.39
PRKCQ-202ENST00000397176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
PRKCQ-202ENST00000397176 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
PRKCQ-202ENST00000397176 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
PRKCQ-202ENST00000397176 CCER1Q8TC90 406 aaPredicted RBP17.44■□□□□ 0.38
PRKCQ-202ENST00000397176 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
PRKCQ-202ENST00000397176 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
PRKCQ-202ENST00000397176 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
PRKCQ-202ENST00000397176 BCL11AQ9H165 835 aa17.15■□□□□ 0.34
PRKCQ-202ENST00000397176 MIER1Q8N108 512 aa17.05■□□□□ 0.32
PRKCQ-202ENST00000397176 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
PRKCQ-202ENST00000397176 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
PRKCQ-202ENST00000397176 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
PRKCQ-202ENST00000397176 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
PRKCQ-202ENST00000397176 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.29
PRKCQ-202ENST00000397176 BCANQ96GW7 911 aa16.68■□□□□ 0.26
PRKCQ-202ENST00000397176 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
PRKCQ-202ENST00000397176 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
PRKCQ-202ENST00000397176 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
PRKCQ-202ENST00000397176 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
PRKCQ-202ENST00000397176 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
PRKCQ-202ENST00000397176 ABCC9O60706 1549 aa16.55■□□□□ 0.24
PRKCQ-202ENST00000397176 FKBP8Q14318 412 aa16.44■□□□□ 0.22
PRKCQ-202ENST00000397176 RBM19Q9Y4C8 960 aaKnown RBP16.43■□□□□ 0.22
PRKCQ-202ENST00000397176 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
PRKCQ-202ENST00000397176 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
PRKCQ-202ENST00000397176 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
PRKCQ-202ENST00000397176 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
PRKCQ-202ENST00000397176 ITGAEP38570 1179 aa16.39■□□□□ 0.21
PRKCQ-202ENST00000397176 MSH5O43196 834 aa16.31■□□□□ 0.2
PRKCQ-202ENST00000397176 ERICH6Q7L0X2 663 aa16.29■□□□□ 0.2
PRKCQ-202ENST00000397176 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
PRKCQ-202ENST00000397176 NEFLP07196 543 aa16.26■□□□□ 0.19
PRKCQ-202ENST00000397176 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
PRKCQ-202ENST00000397176 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
PRKCQ-202ENST00000397176 SOGA1O94964 1423 aa16.19■□□□□ 0.18
PRKCQ-202ENST00000397176 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
PRKCQ-202ENST00000397176 APLP2Q06481 763 aa16.17■□□□□ 0.18
PRKCQ-202ENST00000397176 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
PRKCQ-202ENST00000397176 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
PRKCQ-202ENST00000397176 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
PRKCQ-202ENST00000397176 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
PRKCQ-202ENST00000397176 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
PRKCQ-202ENST00000397176 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.17
PRKCQ-202ENST00000397176 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.17
PRKCQ-202ENST00000397176 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.16
PRKCQ-202ENST00000397176 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
PRKCQ-202ENST00000397176 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
PRKCQ-202ENST00000397176 WIZO95785 1651 aa16.04■□□□□ 0.16
PRKCQ-202ENST00000397176 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
PRKCQ-202ENST00000397176 NBR1Q14596 966 aa16.01■□□□□ 0.15
PRKCQ-202ENST00000397176 FANCIQ9NVI1 1328 aa16.01■□□□□ 0.15
PRKCQ-202ENST00000397176 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
PRKCQ-202ENST00000397176 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
PRKCQ-202ENST00000397176 CCDC136Q96JN2 1154 aa15.96■□□□□ 0.15
PRKCQ-202ENST00000397176 SALL2Q9Y467 1007 aaPredicted RBP15.96■□□□□ 0.15
PRKCQ-202ENST00000397176 CLIP1P30622 1438 aa15.95■□□□□ 0.14
PRKCQ-202ENST00000397176 MYT1LQ9UL68 1186 aa15.91■□□□□ 0.14
PRKCQ-202ENST00000397176 EIF4G1Q04637 1599 aaKnown RBP15.9■□□□□ 0.14
PRKCQ-202ENST00000397176 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
PRKCQ-202ENST00000397176 RTN4Q9NQC3 1192 aaKnown RBP15.89■□□□□ 0.13
PRKCQ-202ENST00000397176 ANP32CO43423 234 aa15.86■□□□□ 0.13
PRKCQ-202ENST00000397176 EEA1Q15075 1411 aa15.86■□□□□ 0.13
PRKCQ-202ENST00000397176 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.13
PRKCQ-202ENST00000397176 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRKCQ-202ENST00000397176 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
PRKCQ-202ENST00000397176 PAK3O75914 559 aaPredicted RBP15.81■□□□□ 0.12
PRKCQ-202ENST00000397176 IL27Q8NEV9 243 aa15.8■□□□□ 0.12
PRKCQ-202ENST00000397176 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
PRKCQ-202ENST00000397176 SIN3AQ96ST3 1273 aa15.79■□□□□ 0.12
PRKCQ-202ENST00000397176 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
PRKCQ-202ENST00000397176 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
PRKCQ-202ENST00000397176 B4GALNT3Q6L9W6 998 aa15.77■□□□□ 0.11
PRKCQ-202ENST00000397176 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
PRKCQ-202ENST00000397176 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
PRKCQ-202ENST00000397176 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
PRKCQ-202ENST00000397176 NACADO15069 1562 aa15.71■□□□□ 0.11
PRKCQ-202ENST00000397176 ERICH6BQ5W0A0 696 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms