RNA–Protein interactions for RNA: ENST00000567609.1

LINC01254-202, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

TSL 1 (best) BASIC

Gene LINC01254, Length 1,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-202ENST00000567609 NISCHQ9Y2I1 1504 aa23.49■■□□□ 1.35
LINC01254-202ENST00000567609 CCDC180Q9P1Z9 1646 aa20.43■□□□□ 0.86
LINC01254-202ENST00000567609 HRCP23327 699 aa20.24■□□□□ 0.83
LINC01254-202ENST00000567609 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
LINC01254-202ENST00000567609 ZCCHC6Q5VYS8 1495 aaKnown RBP20.03■□□□□ 0.8
LINC01254-202ENST00000567609 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
LINC01254-202ENST00000567609 ABCC9O60706 1549 aa19.88■□□□□ 0.77
LINC01254-202ENST00000567609 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
LINC01254-202ENST00000567609 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
LINC01254-202ENST00000567609 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
LINC01254-202ENST00000567609 PCGF6Q9BYE7 350 aa19.65■□□□□ 0.74
LINC01254-202ENST00000567609 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
LINC01254-202ENST00000567609 PPARGC1BQ86YN6 1023 aaKnown RBP19.44■□□□□ 0.7
LINC01254-202ENST00000567609 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
LINC01254-202ENST00000567609 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
LINC01254-202ENST00000567609 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
LINC01254-202ENST00000567609 NACADO15069 1562 aa19.15■□□□□ 0.66
LINC01254-202ENST00000567609 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
LINC01254-202ENST00000567609 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
LINC01254-202ENST00000567609 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
LINC01254-202ENST00000567609 MYT1Q01538 1121 aa18.88■□□□□ 0.61
LINC01254-202ENST00000567609 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
LINC01254-202ENST00000567609 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
LINC01254-202ENST00000567609 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
LINC01254-202ENST00000567609 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
LINC01254-202ENST00000567609 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.58
LINC01254-202ENST00000567609 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
LINC01254-202ENST00000567609 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
LINC01254-202ENST00000567609 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
LINC01254-202ENST00000567609 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
LINC01254-202ENST00000567609 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
LINC01254-202ENST00000567609 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
LINC01254-202ENST00000567609 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.53
LINC01254-202ENST00000567609 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.53
LINC01254-202ENST00000567609 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
LINC01254-202ENST00000567609 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
LINC01254-202ENST00000567609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
LINC01254-202ENST00000567609 BAZ1AQ9NRL2 1556 aaPredicted RBP18.22■□□□□ 0.51
LINC01254-202ENST00000567609 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
LINC01254-202ENST00000567609 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
LINC01254-202ENST00000567609 ZNF316A6NFI3 1004 aaPredicted RBP18.11■□□□□ 0.49
LINC01254-202ENST00000567609 WIZO95785 1651 aa18.1■□□□□ 0.49
LINC01254-202ENST00000567609 EEA1Q15075 1411 aa18.1■□□□□ 0.49
LINC01254-202ENST00000567609 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.49
LINC01254-202ENST00000567609 CEP162Q5TB80 1403 aa18.08■□□□□ 0.48
LINC01254-202ENST00000567609 CLSPNQ9HAW4 1339 aa18.02■□□□□ 0.47
LINC01254-202ENST00000567609 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
LINC01254-202ENST00000567609 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
LINC01254-202ENST00000567609 TOP2AP11388 1531 aaKnown RBP17.99■□□□□ 0.47
LINC01254-202ENST00000567609 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.46
LINC01254-202ENST00000567609 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
LINC01254-202ENST00000567609 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
LINC01254-202ENST00000567609 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
LINC01254-202ENST00000567609 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
LINC01254-202ENST00000567609 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
LINC01254-202ENST00000567609 SOGA1O94964 1423 aa17.8■□□□□ 0.44
LINC01254-202ENST00000567609 MIER1Q8N108 512 aa17.79■□□□□ 0.44
LINC01254-202ENST00000567609 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
LINC01254-202ENST00000567609 KIF21BO75037 1637 aa17.78■□□□□ 0.44
LINC01254-202ENST00000567609 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
LINC01254-202ENST00000567609 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
LINC01254-202ENST00000567609 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
LINC01254-202ENST00000567609 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
LINC01254-202ENST00000567609 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
LINC01254-202ENST00000567609 VPS8Q8N3P4 1428 aa17.69■□□□□ 0.42
LINC01254-202ENST00000567609 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
LINC01254-202ENST00000567609 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
LINC01254-202ENST00000567609 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
LINC01254-202ENST00000567609 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
LINC01254-202ENST00000567609 CLIP1P30622 1438 aa17.62■□□□□ 0.41
LINC01254-202ENST00000567609 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
LINC01254-202ENST00000567609 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
LINC01254-202ENST00000567609 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
LINC01254-202ENST00000567609 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
LINC01254-202ENST00000567609 APLP2Q06481 763 aa17.49■□□□□ 0.39
LINC01254-202ENST00000567609 ANP32EQ9BTT0 268 aa17.49■□□□□ 0.39
LINC01254-202ENST00000567609 CUX2O14529 1486 aa17.48■□□□□ 0.39
LINC01254-202ENST00000567609 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
LINC01254-202ENST00000567609 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
LINC01254-202ENST00000567609 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
LINC01254-202ENST00000567609 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.37
LINC01254-202ENST00000567609 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
LINC01254-202ENST00000567609 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
LINC01254-202ENST00000567609 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
LINC01254-202ENST00000567609 BIVM-ERCC5R4GMW8 1640 aa17.28■□□□□ 0.36
LINC01254-202ENST00000567609 NESP48681 1621 aa17.27■□□□□ 0.36
LINC01254-202ENST00000567609 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
LINC01254-202ENST00000567609 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
LINC01254-202ENST00000567609 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
LINC01254-202ENST00000567609 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
LINC01254-202ENST00000567609 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
LINC01254-202ENST00000567609 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
LINC01254-202ENST00000567609 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
LINC01254-202ENST00000567609 TIMELESSQ9UNS1 1208 aa17.13■□□□□ 0.33
LINC01254-202ENST00000567609 CFTRP13569 1480 aa17.13■□□□□ 0.33
LINC01254-202ENST00000567609 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
LINC01254-202ENST00000567609 CCER2I3L3R5 266 aa17.09■□□□□ 0.33
LINC01254-202ENST00000567609 NEFLP07196 543 aa17.09■□□□□ 0.33
LINC01254-202ENST00000567609 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
LINC01254-202ENST00000567609 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms