RNA–Protein interactions for RNA: ENST00000344111.3

COX19-201, Transcript of cytochrome c oxidase assembly factor COX19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COX19, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX19-201ENST00000344111 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.45
COX19-201ENST00000344111 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
COX19-201ENST00000344111 ABCC9O60706 1549 aa20.46■□□□□ 0.87
COX19-201ENST00000344111 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
COX19-201ENST00000344111 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
COX19-201ENST00000344111 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
COX19-201ENST00000344111 NACADO15069 1562 aa20.1■□□□□ 0.81
COX19-201ENST00000344111 DCAF8L2P0C7V8 631 aa20.04■□□□□ 0.8
COX19-201ENST00000344111 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
COX19-201ENST00000344111 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
COX19-201ENST00000344111 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
COX19-201ENST00000344111 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
COX19-201ENST00000344111 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
COX19-201ENST00000344111 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
COX19-201ENST00000344111 EIF4G1Q04637 1599 aaKnown RBP18.86■□□□□ 0.61
COX19-201ENST00000344111 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
COX19-201ENST00000344111 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
COX19-201ENST00000344111 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
COX19-201ENST00000344111 BAZ1AQ9NRL2 1556 aaPredicted RBP18.65■□□□□ 0.58
COX19-201ENST00000344111 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
COX19-201ENST00000344111 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
COX19-201ENST00000344111 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.57
COX19-201ENST00000344111 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
COX19-201ENST00000344111 SMARCA2P51531 1590 aa18.5■□□□□ 0.55
COX19-201ENST00000344111 NCAPD3P42695 1498 aa18.49■□□□□ 0.55
COX19-201ENST00000344111 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
COX19-201ENST00000344111 ATAD2BQ9ULI0 1458 aa18.46■□□□□ 0.55
COX19-201ENST00000344111 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
COX19-201ENST00000344111 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
COX19-201ENST00000344111 HRCP23327 699 aa18.31■□□□□ 0.52
COX19-201ENST00000344111 WIZO95785 1651 aa18.31■□□□□ 0.52
COX19-201ENST00000344111 PCGF6Q9BYE7 350 aa18.29■□□□□ 0.52
COX19-201ENST00000344111 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
COX19-201ENST00000344111 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
COX19-201ENST00000344111 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
COX19-201ENST00000344111 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
COX19-201ENST00000344111 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
COX19-201ENST00000344111 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
COX19-201ENST00000344111 CFTRP13569 1480 aa17.87■□□□□ 0.45
COX19-201ENST00000344111 CADPSQ9ULU8 1353 aa17.84■□□□□ 0.45
COX19-201ENST00000344111 MYT1Q01538 1121 aa17.83■□□□□ 0.44
COX19-201ENST00000344111 NESP48681 1621 aa17.82■□□□□ 0.44
COX19-201ENST00000344111 KIF21AQ7Z4S6 1674 aa17.79■□□□□ 0.44
COX19-201ENST00000344111 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
COX19-201ENST00000344111 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
COX19-201ENST00000344111 WDR62O43379 1518 aa17.65■□□□□ 0.42
COX19-201ENST00000344111 CUX2O14529 1486 aa17.63■□□□□ 0.41
COX19-201ENST00000344111 FANCD2Q9BXW9 1451 aa17.63■□□□□ 0.41
COX19-201ENST00000344111 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
COX19-201ENST00000344111 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
COX19-201ENST00000344111 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
COX19-201ENST00000344111 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
COX19-201ENST00000344111 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
COX19-201ENST00000344111 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
COX19-201ENST00000344111 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
COX19-201ENST00000344111 DNMBPQ6XZF7 1577 aa17.48■□□□□ 0.39
COX19-201ENST00000344111 TOPBP1Q92547 1522 aa17.42■□□□□ 0.38
COX19-201ENST00000344111 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
COX19-201ENST00000344111 CUX1P39880 1505 aa17.37■□□□□ 0.37
COX19-201ENST00000344111 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
COX19-201ENST00000344111 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
COX19-201ENST00000344111 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
COX19-201ENST00000344111 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
COX19-201ENST00000344111 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
COX19-201ENST00000344111 CENPBP07199 599 aaPredicted RBP17.31■□□□□ 0.36
COX19-201ENST00000344111 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
COX19-201ENST00000344111 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
COX19-201ENST00000344111 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
COX19-201ENST00000344111 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
COX19-201ENST00000344111 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
COX19-201ENST00000344111 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
COX19-201ENST00000344111 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
COX19-201ENST00000344111 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
COX19-201ENST00000344111 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
COX19-201ENST00000344111 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
COX19-201ENST00000344111 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
COX19-201ENST00000344111 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
COX19-201ENST00000344111 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
COX19-201ENST00000344111 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
COX19-201ENST00000344111 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
COX19-201ENST00000344111 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
COX19-201ENST00000344111 PBRM1Q86U86 1689 aa17.09■□□□□ 0.33
COX19-201ENST00000344111 SOGA1O94964 1423 aa17.09■□□□□ 0.33
COX19-201ENST00000344111 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
COX19-201ENST00000344111 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
COX19-201ENST00000344111 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
COX19-201ENST00000344111 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
COX19-201ENST00000344111 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
COX19-201ENST00000344111 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
COX19-201ENST00000344111 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.31
COX19-201ENST00000344111 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.36e-6■■■■□ 25.1
COX19-201ENST00000344111 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
COX19-201ENST00000344111 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
COX19-201ENST00000344111 CHD1O14646 1710 aa16.93■□□□□ 0.3
COX19-201ENST00000344111 CUL7Q14999 1698 aa16.89■□□□□ 0.29
COX19-201ENST00000344111 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
COX19-201ENST00000344111 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
COX19-201ENST00000344111 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
COX19-201ENST00000344111 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
COX19-201ENST00000344111 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 218.3 ms