Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ATP5G2P1-201ENST00000433580 426 ntBASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 PHKG1P2-201ENST00000457537 863 ntBASIC14.71□□□□□ -0.05
AP4S1Q9Y587 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP4S1Q9Y587 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP4S1Q9Y587 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.7□□□□□ -0.06
AP4S1Q9Y587 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AC108073.2-201ENST00000464002 357 ntBASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 OR7E14P-202ENST00000530490 1290 ntBASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AC024267.1-201ENST00000582320 895 ntBASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AC011467.4-201ENST00000594891 528 ntBASIC14.7□□□□□ -0.06
AP4S1Q9Y587 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.7□□□□□ -0.06
AP4S1Q9Y587 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP4S1Q9Y587 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms