Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TPRKBQ9Y3C4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TPRKBQ9Y3C4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TPRKBQ9Y3C4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.21□□□□□ -0.13
TPRKBQ9Y3C4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
TPRKBQ9Y3C4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.21□□□□□ -0.13
TPRKBQ9Y3C4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 AC107918.4-201ENST00000641966 3141 ntBASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TPRKBQ9Y3C4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 KRT18P27-201ENST00000427733 1299 ntBASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 FGFR3P6-201ENST00000457012 610 ntBASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC025062.2-201ENST00000605477 670 ntBASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC107918.4-202ENST00000641623 219 ntBASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TPRKBQ9Y3C4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 AC073621.1-201ENST00000392730 636 ntBASIC14.19□□□□□ -0.14
TPRKBQ9Y3C4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms