RNA–Protein interactions for RNA: ENST00000342308.9

TMEM230-202, Transcript of transmembrane protein 230, humanhuman

TSL 2 BASIC

Gene TMEM230, Length 1,562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM230-202ENST00000342308 NISCHQ9Y2I1 1504 aa33■■■□□ 2.87
TMEM230-202ENST00000342308 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
TMEM230-202ENST00000342308 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
TMEM230-202ENST00000342308 DCAF1Q9Y4B6 1507 aa27.3■■□□□ 1.96
TMEM230-202ENST00000342308 SHROOM4Q9ULL8 1493 aa27.23■■□□□ 1.95
TMEM230-202ENST00000342308 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
TMEM230-202ENST00000342308 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
TMEM230-202ENST00000342308 ABCC9O60706 1549 aa26.56■■□□□ 1.84
TMEM230-202ENST00000342308 NACADO15069 1562 aa26.49■■□□□ 1.83
TMEM230-202ENST00000342308 SUPT5HO00267 1087 aaKnown RBP26.41■■□□□ 1.82
TMEM230-202ENST00000342308 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
TMEM230-202ENST00000342308 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
TMEM230-202ENST00000342308 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
TMEM230-202ENST00000342308 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
TMEM230-202ENST00000342308 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
TMEM230-202ENST00000342308 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
TMEM230-202ENST00000342308 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
TMEM230-202ENST00000342308 BAZ1AQ9NRL2 1556 aaPredicted RBP25.45■■□□□ 1.66
TMEM230-202ENST00000342308 WIZO95785 1651 aa25.38■■□□□ 1.65
TMEM230-202ENST00000342308 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
TMEM230-202ENST00000342308 SMARCA4P51532 1647 aa25.3■■□□□ 1.64
TMEM230-202ENST00000342308 PABPN1Q86U42 306 aaKnown RBP eCLIP25.12■■□□□ 1.61
TMEM230-202ENST00000342308 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
TMEM230-202ENST00000342308 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
TMEM230-202ENST00000342308 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
TMEM230-202ENST00000342308 SMARCA2P51531 1590 aa24.89■■□□□ 1.57
TMEM230-202ENST00000342308 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
TMEM230-202ENST00000342308 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
TMEM230-202ENST00000342308 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
TMEM230-202ENST00000342308 BAZ1BQ9UIG0 1483 aaKnown RBP24.61■■□□□ 1.53
TMEM230-202ENST00000342308 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
TMEM230-202ENST00000342308 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
TMEM230-202ENST00000342308 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
TMEM230-202ENST00000342308 NCAPD3P42695 1498 aa24.43■■□□□ 1.5
TMEM230-202ENST00000342308 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
TMEM230-202ENST00000342308 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
TMEM230-202ENST00000342308 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
TMEM230-202ENST00000342308 EEA1Q15075 1411 aa24.16■■□□□ 1.46
TMEM230-202ENST00000342308 SOGA1O94964 1423 aa24.09■■□□□ 1.45
TMEM230-202ENST00000342308 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
TMEM230-202ENST00000342308 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
TMEM230-202ENST00000342308 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
TMEM230-202ENST00000342308 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
TMEM230-202ENST00000342308 CFTRP13569 1480 aa24.02■■□□□ 1.44
TMEM230-202ENST00000342308 EHMT2Q96KQ7 1210 aa23.99■■□□□ 1.43
TMEM230-202ENST00000342308 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
TMEM230-202ENST00000342308 PCGF6Q9BYE7 350 aa23.97■■□□□ 1.43
TMEM230-202ENST00000342308 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.43
TMEM230-202ENST00000342308 TRIM26Q12899 539 aaPredicted RBP23.86■■□□□ 1.41
TMEM230-202ENST00000342308 KIF21BO75037 1637 aa23.86■■□□□ 1.41
TMEM230-202ENST00000342308 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
TMEM230-202ENST00000342308 GOLGA3Q08378 1498 aa23.85■■□□□ 1.41
TMEM230-202ENST00000342308 CUX1P39880 1505 aa23.83■■□□□ 1.41
TMEM230-202ENST00000342308 AEBP2Q6ZN18 517 aaPredicted RBP23.82■■□□□ 1.4
TMEM230-202ENST00000342308 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
TMEM230-202ENST00000342308 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
TMEM230-202ENST00000342308 CEP162Q5TB80 1403 aa23.76■■□□□ 1.39
TMEM230-202ENST00000342308 HRCP23327 699 aa23.69■■□□□ 1.38
TMEM230-202ENST00000342308 UBTFP17480 764 aaKnown RBP23.68■■□□□ 1.38
TMEM230-202ENST00000342308 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
TMEM230-202ENST00000342308 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
TMEM230-202ENST00000342308 KIF27Q86VH2 1401 aa23.58■■□□□ 1.37
TMEM230-202ENST00000342308 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
TMEM230-202ENST00000342308 PRXQ9BXM0 1461 aa23.55■■□□□ 1.36
TMEM230-202ENST00000342308 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
TMEM230-202ENST00000342308 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
TMEM230-202ENST00000342308 NESP48681 1621 aa23.48■■□□□ 1.35
TMEM230-202ENST00000342308 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
TMEM230-202ENST00000342308 CLIP1P30622 1438 aa23.46■■□□□ 1.35
TMEM230-202ENST00000342308 CUX2O14529 1486 aa23.41■■□□□ 1.34
TMEM230-202ENST00000342308 TOPBP1Q92547 1522 aa23.39■■□□□ 1.34
TMEM230-202ENST00000342308 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
TMEM230-202ENST00000342308 VPS8Q8N3P4 1428 aa23.34■■□□□ 1.33
TMEM230-202ENST00000342308 IGF1RP08069 1367 aa23.32■■□□□ 1.32
TMEM230-202ENST00000342308 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
TMEM230-202ENST00000342308 POLA1P09884 1462 aaPredicted RBP23.3■■□□□ 1.32
TMEM230-202ENST00000342308 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
TMEM230-202ENST00000342308 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
TMEM230-202ENST00000342308 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
TMEM230-202ENST00000342308 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
TMEM230-202ENST00000342308 WDR97A6NE52 1622 aa23.25■■□□□ 1.31
TMEM230-202ENST00000342308 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
TMEM230-202ENST00000342308 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
TMEM230-202ENST00000342308 ARAP1Q96P48 1450 aa23.2■■□□□ 1.31
TMEM230-202ENST00000342308 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
TMEM230-202ENST00000342308 CUL7Q14999 1698 aa23.16■■□□□ 1.3
TMEM230-202ENST00000342308 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
TMEM230-202ENST00000342308 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
TMEM230-202ENST00000342308 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
TMEM230-202ENST00000342308 TTBK1Q5TCY1 1321 aaPredicted RBP23.1■■□□□ 1.29
TMEM230-202ENST00000342308 APLP2Q06481 763 aa23.09■■□□□ 1.29
TMEM230-202ENST00000342308 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
TMEM230-202ENST00000342308 CTTNBP2Q8WZ74 1663 aa23.02■■□□□ 1.27
TMEM230-202ENST00000342308 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
TMEM230-202ENST00000342308 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
TMEM230-202ENST00000342308 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
TMEM230-202ENST00000342308 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
TMEM230-202ENST00000342308 EFCAB5A4FU69 1503 aa22.9■■□□□ 1.26
TMEM230-202ENST00000342308 WDR62O43379 1518 aa22.88■■□□□ 1.25
TMEM230-202ENST00000342308 MAP3K1Q13233 1512 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms