Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
ERCC1P07992 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ERCC1P07992 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.86□□□□□ -0.19
ERCC1P07992 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ERCC1P07992 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.85□□□□□ -0.19
ERCC1P07992 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ERCC1P07992 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ERCC1P07992 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 AC138035.3-201ENST00000622706 2791 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ERCC1P07992 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ERCC1P07992 TSPY16P-201ENST00000449843 468 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 AC190387.1-201ENST00000551683 408 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 AC009118.2-201ENST00000613275 655 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 AC090616.6-203ENST00000579186 1945 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ERCC1P07992 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 AC134407.2-201ENST00000625089 1978 ntBASIC13.85□□□□□ -0.19
ERCC1P07992 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.85□□□□□ -0.19
ERCC1P07992 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.85□□□□□ -0.19
ERCC1P07992 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ERCC1P07992 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.84□□□□□ -0.19
ERCC1P07992 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.84□□□□□ -0.19
ERCC1P07992 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ERCC1P07992 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ERCC1P07992 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.84□□□□□ -0.19
ERCC1P07992 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.84□□□□□ -0.19
ERCC1P07992 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.84□□□□□ -0.19
ERCC1P07992 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ERCC1P07992 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
ERCC1P07992 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.84□□□□□ -0.19
ERCC1P07992 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.84□□□□□ -0.19
ERCC1P07992 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.84□□□□□ -0.19
ERCC1P07992 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.84□□□□□ -0.19
ERCC1P07992 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.84□□□□□ -0.19
ERCC1P07992 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms