RNA–Protein interactions for RNA: ENST00000409092.1

RBM43-202, Transcript of RNA binding motif protein 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RBM43, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM43-202ENST00000409092 NISCHQ9Y2I1 1504 aa40.55■■■■■ 4.08
RBM43-202ENST00000409092 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
RBM43-202ENST00000409092 ABCC9O60706 1549 aa36.36■■■■□ 3.41
RBM43-202ENST00000409092 RB1CC1Q8TDY2 1594 aa34.65■■■■□ 3.14
RBM43-202ENST00000409092 NACADO15069 1562 aa34.42■■■■□ 3.1
RBM43-202ENST00000409092 DNAJC5BQ9UF47 199 aa34.14■■■■□ 3.06
RBM43-202ENST00000409092 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
RBM43-202ENST00000409092 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
RBM43-202ENST00000409092 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
RBM43-202ENST00000409092 PABPN1Q86U42 306 aaKnown RBP eCLIP33.8■■■■□ 3
RBM43-202ENST00000409092 BICRAQ9NZM4 1560 aa33.7■■■□□ 2.99
RBM43-202ENST00000409092 ZCCHC6Q5VYS8 1495 aaKnown RBP33.62■■■□□ 2.97
RBM43-202ENST00000409092 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
RBM43-202ENST00000409092 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
RBM43-202ENST00000409092 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
RBM43-202ENST00000409092 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
RBM43-202ENST00000409092 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
RBM43-202ENST00000409092 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
RBM43-202ENST00000409092 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
RBM43-202ENST00000409092 ATAD2BQ9ULI0 1458 aa31.66■■■□□ 2.66
RBM43-202ENST00000409092 SMARCA4P51532 1647 aa31.65■■■□□ 2.66
RBM43-202ENST00000409092 SMARCA2P51531 1590 aa31.58■■■□□ 2.65
RBM43-202ENST00000409092 HMGXB3Q12766 1538 aa31.56■■■□□ 2.64
RBM43-202ENST00000409092 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
RBM43-202ENST00000409092 CUX2O14529 1486 aa31.39■■■□□ 2.62
RBM43-202ENST00000409092 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.61
RBM43-202ENST00000409092 ERCC6Q03468 1493 aa31.37■■■□□ 2.61
RBM43-202ENST00000409092 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
RBM43-202ENST00000409092 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
RBM43-202ENST00000409092 NESP48681 1621 aa31.25■■■□□ 2.59
RBM43-202ENST00000409092 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
RBM43-202ENST00000409092 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
RBM43-202ENST00000409092 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.56
RBM43-202ENST00000409092 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
RBM43-202ENST00000409092 WIZO95785 1651 aa30.87■■■□□ 2.53
RBM43-202ENST00000409092 PDS5BQ9NTI5 1447 aa30.83■■■□□ 2.53
RBM43-202ENST00000409092 CADPSQ9ULU8 1353 aa30.77■■■□□ 2.52
RBM43-202ENST00000409092 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
RBM43-202ENST00000409092 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
RBM43-202ENST00000409092 WDR62O43379 1518 aa30.56■■■□□ 2.48
RBM43-202ENST00000409092 TOP2AP11388 1531 aaKnown RBP30.48■■■□□ 2.47
RBM43-202ENST00000409092 CEP164Q9UPV0 1460 aa30.46■■■□□ 2.47
RBM43-202ENST00000409092 CFTRP13569 1480 aa30.44■■■□□ 2.46
RBM43-202ENST00000409092 FANCD2Q9BXW9 1451 aa30.42■■■□□ 2.46
RBM43-202ENST00000409092 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
RBM43-202ENST00000409092 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
RBM43-202ENST00000409092 CCDC88BA6NC98 1476 aa30.11■■■□□ 2.41
RBM43-202ENST00000409092 TRIM41Q8WV44 630 aa29.88■■■□□ 2.37
RBM43-202ENST00000409092 TOPBP1Q92547 1522 aa29.87■■■□□ 2.37
RBM43-202ENST00000409092 OSCARQ8IYS5 282 aa29.87■■■□□ 2.37
RBM43-202ENST00000409092 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
RBM43-202ENST00000409092 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
RBM43-202ENST00000409092 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
RBM43-202ENST00000409092 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
RBM43-202ENST00000409092 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
RBM43-202ENST00000409092 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.34
RBM43-202ENST00000409092 RIMBP3CA6NJZ7 1639 aa29.59■■■□□ 2.33
RBM43-202ENST00000409092 RIMBP3BA6NNM3 1639 aa29.59■■■□□ 2.33
RBM43-202ENST00000409092 RIMBP3Q9UFD9 1639 aa29.59■■■□□ 2.33
RBM43-202ENST00000409092 POLA1P09884 1462 aaPredicted RBP29.56■■■□□ 2.32
RBM43-202ENST00000409092 AQRO60306 1485 aaKnown RBP eCLIP29.51■■■□□ 2.31
RBM43-202ENST00000409092 CHD1O14646 1710 aa29.48■■■□□ 2.31
RBM43-202ENST00000409092 ARHGEF11O15085 1522 aa29.47■■■□□ 2.31
RBM43-202ENST00000409092 RAD54L2Q9Y4B4 1467 aa29.42■■■□□ 2.3
RBM43-202ENST00000409092 SOGA1O94964 1423 aa29.37■■■□□ 2.29
RBM43-202ENST00000409092 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
RBM43-202ENST00000409092 WDR97A6NE52 1622 aa29.35■■■□□ 2.29
RBM43-202ENST00000409092 CUX1P39880 1505 aa29.35■■■□□ 2.29
RBM43-202ENST00000409092 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
RBM43-202ENST00000409092 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
RBM43-202ENST00000409092 FBLN2P98095 1184 aa29.23■■■□□ 2.27
RBM43-202ENST00000409092 ARAP1Q96P48 1450 aa29.18■■■□□ 2.26
RBM43-202ENST00000409092 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
RBM43-202ENST00000409092 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
RBM43-202ENST00000409092 GRIN2BQ13224 1484 aa29.15■■■□□ 2.26
RBM43-202ENST00000409092 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
RBM43-202ENST00000409092 PBRM1Q86U86 1689 aa29.1■■■□□ 2.25
RBM43-202ENST00000409092 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
RBM43-202ENST00000409092 SYNJ2O15056 1496 aa29.07■■■□□ 2.24
RBM43-202ENST00000409092 SUPT5HO00267 1087 aaKnown RBP29.06■■■□□ 2.24
RBM43-202ENST00000409092 CHMP7Q8WUX9 453 aaPredicted RBP29.05■■■□□ 2.24
RBM43-202ENST00000409092 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
RBM43-202ENST00000409092 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
RBM43-202ENST00000409092 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
RBM43-202ENST00000409092 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
RBM43-202ENST00000409092 TOP2BQ02880 1626 aa28.89■■■□□ 2.22
RBM43-202ENST00000409092 WRNQ14191 1432 aaPredicted RBP eCLIP28.87■■■□□ 2.21
RBM43-202ENST00000409092 ADAMTS12P58397 1594 aa28.8■■■□□ 2.2
RBM43-202ENST00000409092 TRHP20396 242 aaPredicted RBP28.8■■■□□ 2.2
RBM43-202ENST00000409092 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
RBM43-202ENST00000409092 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
RBM43-202ENST00000409092 NUP160Q12769 1436 aa28.71■■■□□ 2.19
RBM43-202ENST00000409092 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
RBM43-202ENST00000409092 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
RBM43-202ENST00000409092 ERCC6L2Q5T890 1561 aa28.67■■■□□ 2.18
RBM43-202ENST00000409092 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
RBM43-202ENST00000409092 RUSC2Q8N2Y8 1516 aa28.41■■■□□ 2.14
RBM43-202ENST00000409092 PRG4Q92954 1404 aaPredicted RBP28.38■■■□□ 2.13
RBM43-202ENST00000409092 JPH4Q96JJ6 628 aa28.35■■■□□ 2.13
RBM43-202ENST00000409092 IGF1RP08069 1367 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms