Protein–RNA interactions for Protein: Q9Y5J1

UTP18, U3 small nucleolar RNA-associated protein 18 homolog, humanhuman

Known RBP eCLIP

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UTP18Q9Y5J1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.05□□□□□ -1.769e-8■□□□□ 9.8
UTP18Q9Y5J1 FKTN-207ENST00000490134 351 ntTSL 53.99□□□□□ -1.779e-8■□□□□ 9.8
UTP18Q9Y5J1 NOP58-207ENST00000478941 508 ntTSL 36.06□□□□□ -1.445e-14■□□□□ 9.7
UTP18Q9Y5J1 SNORD70.1-201ENST00000391007 85 ntBASIC3.78□□□□□ -1.85e-14■□□□□ 9.7
UTP18Q9Y5J1 NCL-210ENST00000494618 910 ntTSL 26.64□□□□□ -1.358e-11■□□□□ 9.7
UTP18Q9Y5J1 SNORD82-201ENST00000365530 70 ntBASIC4.41□□□□□ -1.78e-11■□□□□ 9.7
UTP18Q9Y5J1 LAMA5-210ENST00000491036 728 ntTSL 216.8■□□□□ 0.283e-7■□□□□ 9.7
UTP18Q9Y5J1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.682e-6■□□□□ 9.7
UTP18Q9Y5J1 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 314.54□□□□□ -0.082e-47■□□□□ 9.6
UTP18Q9Y5J1 PRAME-211ENST00000476336 589 ntTSL 214.18□□□□□ -0.142e-47■□□□□ 9.6
UTP18Q9Y5J1 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 213.3□□□□□ -0.282e-47■□□□□ 9.6
UTP18Q9Y5J1 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.292e-47■□□□□ 9.6
UTP18Q9Y5J1 PRAME-204ENST00000403441 567 ntAPPRIS ALT2 TSL 312.8□□□□□ -0.362e-47■□□□□ 9.6
UTP18Q9Y5J1 PRAME-210ENST00000442481 581 ntTSL 312.25□□□□□ -0.452e-47■□□□□ 9.6
UTP18Q9Y5J1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.33■■□□□ 1.973e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.84■■□□□ 1.733e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.71■■□□□ 1.553e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.193e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.573e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.113e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-222ENST00000568883 1863 ntTSL 5 BASIC14□□□□□ -0.173e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.253e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-224ENST00000569857 1355 ntTSL 513.32□□□□□ -0.283e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-208ENST00000563275 699 ntTSL 1 (best)13.17□□□□□ -0.33e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-205ENST00000561609 1568 ntTSL 1 (best)12.42□□□□□ -0.423e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-219ENST00000567118 2254 ntTSL 212.31□□□□□ -0.443e-8■□□□□ 9.6
UTP18Q9Y5J1 PKM-221ENST00000568743 580 ntTSL 1 (best)10.89□□□□□ -0.673e-8■□□□□ 9.6
UTP18Q9Y5J1 RHOT2-212ENST00000564659 854 ntTSL 216.69■□□□□ 0.265e-6■□□□□ 9.6
UTP18Q9Y5J1 RHOT2-220ENST00000569197 530 ntTSL 512.21□□□□□ -0.455e-6■□□□□ 9.6
UTP18Q9Y5J1 INTS11-223ENST00000498173 1589 ntTSL 223.82■■□□□ 1.43e-9■□□□□ 9.5
UTP18Q9Y5J1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.86■■□□□ 1.253e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.183e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.37■■□□□ 1.173e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.1■■□□□ 1.133e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-207ENST00000589755 793 ntTSL 222.08■■□□□ 1.133e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.52■■□□□ 1.043e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.49■■□□□ 1.033e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-235ENST00000527719 750 ntTSL 520.85■□□□□ 0.933e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.34■□□□□ 0.853e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-230ENST00000526332 579 ntTSL 420.2■□□□□ 0.823e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-210ENST00000593124 1389 ntTSL 520.08■□□□□ 0.813e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-221ENST00000496353 2428 ntTSL 219.85■□□□□ 0.773e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-218ENST00000488042 1134 ntTSL 219.17■□□□□ 0.663e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-237ENST00000530031 800 ntTSL 518.9■□□□□ 0.623e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-207ENST00000434694 1056 ntTSL 518.89■□□□□ 0.613e-9■□□□□ 9.5
UTP18Q9Y5J1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.553e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-243ENST00000532772 1618 ntTSL 518.45■□□□□ 0.543e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.11■□□□□ 0.493e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-242ENST00000531377 816 ntTSL 518.07■□□□□ 0.483e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.92■□□□□ 0.463e-9■□□□□ 9.5
UTP18Q9Y5J1 SQLE-205ENST00000521232 711 ntTSL 317.92■□□□□ 0.463e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-202ENST00000588498 690 ntTSL 317.92■□□□□ 0.463e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-232ENST00000526904 551 ntTSL 417.67■□□□□ 0.423e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-201ENST00000323275 2450 ntTSL 1 (best)17.58■□□□□ 0.413e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-203ENST00000588869 966 ntTSL 517.29■□□□□ 0.363e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-210ENST00000458452 2571 ntTSL 217.17■□□□□ 0.343e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-233ENST00000527098 2004 ntTSL 216.77■□□□□ 0.273e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.38■□□□□ 0.213e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.213e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-209ENST00000591248 1377 ntTSL 516.27■□□□□ 0.23e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-236ENST00000528879 1524 ntTSL 516.18■□□□□ 0.183e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.05■□□□□ 0.163e-9■□□□□ 9.5
UTP18Q9Y5J1 CDC37-206ENST00000589629 728 ntTSL 315.89■□□□□ 0.133e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-206ENST00000430786 849 ntTSL 514.97□□□□□ -0.013e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-227ENST00000525603 738 ntTSL 314.97□□□□□ -0.013e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-229ENST00000526113 591 ntTSL 514.81□□□□□ -0.043e-9■□□□□ 9.5
UTP18Q9Y5J1 INTS11-231ENST00000526797 659 ntTSL 412.15□□□□□ -0.463e-9■□□□□ 9.5
UTP18Q9Y5J1 NCL-204ENST00000436894 562 ntTSL 44.75□□□□□ -1.653e-20■□□□□ 9.5
UTP18Q9Y5J1 FGFR4-211ENST00000509511 1341 ntTSL 1 (best)21.01■□□□□ 0.952e-6■□□□□ 9.5
UTP18Q9Y5J1 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)31.56■■■□□ 2.641e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.141e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.031e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.67■■■□□ 2.021e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-220ENST00000519767 970 ntTSL 1 (best)26.46■■□□□ 1.831e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.81e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-217ENST00000518538 535 ntTSL 223.48■■□□□ 1.351e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.71■■□□□ 1.231e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.03■□□□□ 0.81e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.44■□□□□ 0.71e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.611e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-221ENST00000520265 336 ntTSL 515.02■□□□□ -01e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.57□□□□□ -0.081e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.08□□□□□ -0.161e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)13.99□□□□□ -0.171e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.73□□□□□ -0.211e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.261e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC12.97□□□□□ -0.331e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC12.97□□□□□ -0.331e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.331e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)10.55□□□□□ -0.721e-11■□□□□ 9.4
UTP18Q9Y5J1 VEGFA-214ENST00000493786 551 ntTSL 28.22□□□□□ -1.091e-11■□□□□ 9.4
Retrieved 100 of 2,623 protein–RNA pairs in 72.3 ms