Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.29■■□□□ 1.8
PDLIM7Q9NR12 AL031432.3-201ENST00000607698 485 ntBASIC26.29■■□□□ 1.8
PDLIM7Q9NR12 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.29■■□□□ 1.8
PDLIM7Q9NR12 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDLIM7Q9NR12 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
PDLIM7Q9NR12 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
PDLIM7Q9NR12 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.27■■□□□ 1.8
PDLIM7Q9NR12 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.27■■□□□ 1.8
PDLIM7Q9NR12 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDLIM7Q9NR12 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
PDLIM7Q9NR12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.26■■□□□ 1.79
PDLIM7Q9NR12 MIR5787-201ENST00000611784 55 ntBASIC26.26■■□□□ 1.79
PDLIM7Q9NR12 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDLIM7Q9NR12 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDLIM7Q9NR12 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.25■■□□□ 1.79
PDLIM7Q9NR12 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDLIM7Q9NR12 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.25■■□□□ 1.79
PDLIM7Q9NR12 SUDS3P1-201ENST00000505831 966 ntBASIC26.25■■□□□ 1.79
PDLIM7Q9NR12 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PDLIM7Q9NR12 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDLIM7Q9NR12 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDLIM7Q9NR12 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.23■■□□□ 1.79
PDLIM7Q9NR12 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDLIM7Q9NR12 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.23■■□□□ 1.79
PDLIM7Q9NR12 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.23■■□□□ 1.79
PDLIM7Q9NR12 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.23■■□□□ 1.79
PDLIM7Q9NR12 FOXO3B-201ENST00000395675 1928 ntBASIC26.22■■□□□ 1.79
PDLIM7Q9NR12 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDLIM7Q9NR12 UNC93B3-201ENST00000308076 687 ntBASIC26.22■■□□□ 1.79
PDLIM7Q9NR12 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDLIM7Q9NR12 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDLIM7Q9NR12 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDLIM7Q9NR12 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PDLIM7Q9NR12 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDLIM7Q9NR12 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.2■■□□□ 1.78
PDLIM7Q9NR12 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
PDLIM7Q9NR12 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDLIM7Q9NR12 AF131216.4-201ENST00000638924 1588 ntBASIC26.2■■□□□ 1.78
PDLIM7Q9NR12 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDLIM7Q9NR12 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 AL136162.1-201ENST00000607711 1078 ntBASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDLIM7Q9NR12 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDLIM7Q9NR12 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PDLIM7Q9NR12 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
PDLIM7Q9NR12 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.18■■□□□ 1.78
PDLIM7Q9NR12 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.17■■□□□ 1.78
PDLIM7Q9NR12 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDLIM7Q9NR12 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.17■■□□□ 1.78
PDLIM7Q9NR12 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDLIM7Q9NR12 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PDLIM7Q9NR12 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.17■■□□□ 1.78
PDLIM7Q9NR12 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDLIM7Q9NR12 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDLIM7Q9NR12 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PDLIM7Q9NR12 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
PDLIM7Q9NR12 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDLIM7Q9NR12 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDLIM7Q9NR12 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.15■■□□□ 1.78
PDLIM7Q9NR12 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.15■■□□□ 1.78
PDLIM7Q9NR12 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PDLIM7Q9NR12 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.15■■□□□ 1.78
PDLIM7Q9NR12 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
PDLIM7Q9NR12 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PDLIM7Q9NR12 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDLIM7Q9NR12 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms