Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 RARRES2P11-201ENST00000635158 484 ntBASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VPS13BQ7Z7G8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.52□□□□□ -0.08
VPS13BQ7Z7G8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13BQ7Z7G8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13BQ7Z7G8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13BQ7Z7G8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
VPS13BQ7Z7G8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13BQ7Z7G8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 AC022517.1-201ENST00000592429 346 ntBASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13BQ7Z7G8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 AC091305.1-201ENST00000479476 895 ntBASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 AC142086.6-201ENST00000621154 1765 ntBASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 IRS3P-201ENST00000223076 1006 ntBASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13BQ7Z7G8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13BQ7Z7G8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.48□□□□□ -0.09
VPS13BQ7Z7G8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VPS13BQ7Z7G8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VPS13BQ7Z7G8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.46□□□□□ -0.1
VPS13BQ7Z7G8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.45□□□□□ -0.1
VPS13BQ7Z7G8 IKBKGP1-201ENST00000612193 1073 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms