Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN20P56880 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CLDN20P56880 LINC00543-201ENST00000567234 1845 ntBASIC21.22■□□□□ 0.99
CLDN20P56880 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN20P56880 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN20P56880 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN20P56880 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN20P56880 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN20P56880 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN20P56880 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN20P56880 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN20P56880 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN20P56880 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CLDN20P56880 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.21■□□□□ 0.99
CLDN20P56880 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN20P56880 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CLDN20P56880 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN20P56880 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN20P56880 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLDN20P56880 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN20P56880 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLDN20P56880 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CLDN20P56880 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CLDN20P56880 AC142381.3-201ENST00000568208 1670 ntBASIC21.19■□□□□ 0.98
CLDN20P56880 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN20P56880 KRT18P24-201ENST00000344739 1156 ntBASIC21.19■□□□□ 0.98
CLDN20P56880 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN20P56880 AC120024.1-201ENST00000562672 995 ntBASIC21.19■□□□□ 0.98
CLDN20P56880 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLDN20P56880 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLDN20P56880 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.19■□□□□ 0.98
CLDN20P56880 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CLDN20P56880 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN20P56880 SLC6A10P-202ENST00000431994 2058 ntBASIC21.18■□□□□ 0.98
CLDN20P56880 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN20P56880 AC009299.2-201ENST00000482477 511 ntBASIC21.18■□□□□ 0.98
CLDN20P56880 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN20P56880 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.18■□□□□ 0.98
CLDN20P56880 THA1P-201ENST00000590384 1145 ntBASIC21.18■□□□□ 0.98
CLDN20P56880 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN20P56880 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.18■□□□□ 0.98
CLDN20P56880 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN20P56880 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLDN20P56880 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.17■□□□□ 0.98
CLDN20P56880 AL035685.1-201ENST00000636663 812 ntBASIC21.17■□□□□ 0.98
CLDN20P56880 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN20P56880 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLDN20P56880 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.17■□□□□ 0.98
CLDN20P56880 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN20P56880 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN20P56880 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN20P56880 AL139125.2-201ENST00000623134 1869 ntBASIC21.16■□□□□ 0.98
CLDN20P56880 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN20P56880 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN20P56880 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLDN20P56880 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.16■□□□□ 0.98
CLDN20P56880 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.16■□□□□ 0.98
CLDN20P56880 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLDN20P56880 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN20P56880 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN20P56880 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN20P56880 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN20P56880 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.15■□□□□ 0.98
CLDN20P56880 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.15■□□□□ 0.98
CLDN20P56880 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLDN20P56880 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.14■□□□□ 0.98
CLDN20P56880 AC079834.2-201ENST00000609776 1949 ntBASIC21.14■□□□□ 0.98
CLDN20P56880 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.14■□□□□ 0.97
CLDN20P56880 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLDN20P56880 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CLDN20P56880 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLDN20P56880 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLDN20P56880 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CLDN20P56880 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLDN20P56880 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN20P56880 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN20P56880 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN20P56880 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.12■□□□□ 0.97
CLDN20P56880 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CLDN20P56880 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN20P56880 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN20P56880 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN20P56880 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN20P56880 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.12■□□□□ 0.97
CLDN20P56880 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN20P56880 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CLDN20P56880 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN20P56880 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms