Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA1O95477 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA1O95477 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA1O95477 AF213884.3-201ENST00000563833 479 ntBASIC19.42■□□□□ 0.7
ABCA1O95477 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.42■□□□□ 0.7
ABCA1O95477 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.42■□□□□ 0.7
ABCA1O95477 AP004609.3-201ENST00000610705 1884 ntBASIC19.42■□□□□ 0.7
ABCA1O95477 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA1O95477 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ABCA1O95477 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCA1O95477 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCA1O95477 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA1O95477 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA1O95477 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ABCA1O95477 AC024257.2-201ENST00000549699 147 ntBASIC19.41■□□□□ 0.7
ABCA1O95477 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.41■□□□□ 0.7
ABCA1O95477 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ABCA1O95477 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.4■□□□□ 0.7
ABCA1O95477 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCA1O95477 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.4■□□□□ 0.7
ABCA1O95477 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCA1O95477 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA1O95477 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA1O95477 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ABCA1O95477 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.4■□□□□ 0.7
ABCA1O95477 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.39■□□□□ 0.69
ABCA1O95477 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA1O95477 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA1O95477 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ABCA1O95477 AC087623.3-201ENST00000607047 1098 ntBASIC19.39■□□□□ 0.69
ABCA1O95477 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ABCA1O95477 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 UNC93B3-201ENST00000308076 687 ntBASIC19.38■□□□□ 0.69
ABCA1O95477 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.38■□□□□ 0.69
ABCA1O95477 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA1O95477 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA1O95477 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA1O95477 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ABCA1O95477 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA1O95477 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA1O95477 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA1O95477 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA1O95477 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ABCA1O95477 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA1O95477 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA1O95477 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCA1O95477 AL355001.2-201ENST00000620617 1191 ntBASIC19.36■□□□□ 0.69
ABCA1O95477 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCA1O95477 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA1O95477 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA1O95477 AC105265.2-201ENST00000467189 838 ntBASIC19.35■□□□□ 0.69
ABCA1O95477 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA1O95477 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA1O95477 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA1O95477 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
ABCA1O95477 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA1O95477 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ABCA1O95477 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ABCA1O95477 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCA1O95477 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA1O95477 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ABCA1O95477 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA1O95477 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA1O95477 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ABCA1O95477 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA1O95477 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.34■□□□□ 0.69
ABCA1O95477 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA1O95477 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCA1O95477 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ABCA1O95477 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA1O95477 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA1O95477 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ABCA1O95477 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA1O95477 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.33■□□□□ 0.68
ABCA1O95477 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA1O95477 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA1O95477 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA1O95477 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA1O95477 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA1O95477 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ABCA1O95477 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
ABCA1O95477 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA1O95477 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCA1O95477 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ABCA1O95477 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCA1O95477 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA1O95477 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA1O95477 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCA1O95477 AP001330.3-201ENST00000520123 633 ntBASIC19.31■□□□□ 0.68
ABCA1O95477 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.31■□□□□ 0.68
ABCA1O95477 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCA1O95477 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCA1O95477 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ABCA1O95477 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCA1O95477 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms