Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.74■□□□□ 0.59
CLN5O75503 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CLN5O75503 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.74■□□□□ 0.59
CLN5O75503 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLN5O75503 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLN5O75503 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLN5O75503 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.73■□□□□ 0.59
CLN5O75503 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLN5O75503 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLN5O75503 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.72■□□□□ 0.59
CLN5O75503 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.72■□□□□ 0.59
CLN5O75503 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.72■□□□□ 0.59
CLN5O75503 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.72■□□□□ 0.59
CLN5O75503 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLN5O75503 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLN5O75503 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLN5O75503 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLN5O75503 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLN5O75503 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.71■□□□□ 0.59
CLN5O75503 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLN5O75503 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.71■□□□□ 0.59
CLN5O75503 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLN5O75503 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLN5O75503 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLN5O75503 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.7■□□□□ 0.58
CLN5O75503 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLN5O75503 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.7■□□□□ 0.58
CLN5O75503 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLN5O75503 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 AL157400.5-201ENST00000507624 621 ntBASIC18.69■□□□□ 0.58
CLN5O75503 AC060814.1-201ENST00000554326 538 ntBASIC18.69■□□□□ 0.58
CLN5O75503 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.69■□□□□ 0.58
CLN5O75503 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.69■□□□□ 0.58
CLN5O75503 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CLN5O75503 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLN5O75503 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.68■□□□□ 0.58
CLN5O75503 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLN5O75503 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLN5O75503 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.68■□□□□ 0.58
CLN5O75503 AC025884.2-201ENST00000553429 711 ntBASIC18.68■□□□□ 0.58
CLN5O75503 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.68■□□□□ 0.58
CLN5O75503 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLN5O75503 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 MIR639-201ENST00000384974 98 ntBASIC18.67■□□□□ 0.58
CLN5O75503 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLN5O75503 MIR3960-201ENST00000583311 91 ntBASIC18.67■□□□□ 0.58
CLN5O75503 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.67■□□□□ 0.58
CLN5O75503 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLN5O75503 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLN5O75503 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLN5O75503 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.67■□□□□ 0.58
CLN5O75503 AC097639.1-201ENST00000565519 1891 ntBASIC18.67■□□□□ 0.58
CLN5O75503 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLN5O75503 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLN5O75503 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLN5O75503 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.66■□□□□ 0.58
CLN5O75503 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.66■□□□□ 0.58
CLN5O75503 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.66■□□□□ 0.58
CLN5O75503 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLN5O75503 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLN5O75503 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLN5O75503 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLN5O75503 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLN5O75503 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLN5O75503 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLN5O75503 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms