Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SIRPB1O00241 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIRPB1O00241 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SIRPB1O00241 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.55■□□□□ 0.72
SIRPB1O00241 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.55■□□□□ 0.72
SIRPB1O00241 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SIRPB1O00241 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPB1O00241 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPB1O00241 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPB1O00241 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIRPB1O00241 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SIRPB1O00241 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.54■□□□□ 0.72
SIRPB1O00241 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIRPB1O00241 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIRPB1O00241 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIRPB1O00241 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIRPB1O00241 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
SIRPB1O00241 LONRF2P2-201ENST00000439212 571 ntBASIC19.53■□□□□ 0.72
SIRPB1O00241 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.53■□□□□ 0.72
SIRPB1O00241 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.52■□□□□ 0.72
SIRPB1O00241 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.52■□□□□ 0.72
SIRPB1O00241 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIRPB1O00241 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SIRPB1O00241 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.51■□□□□ 0.71
SIRPB1O00241 AC090877.2-201ENST00000558441 1738 ntBASIC19.51■□□□□ 0.71
SIRPB1O00241 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 AC004987.1-201ENST00000428627 508 ntBASIC19.51■□□□□ 0.71
SIRPB1O00241 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 BHLHE23-202ENST00000612929 1109 ntBASIC19.51■□□□□ 0.71
SIRPB1O00241 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SIRPB1O00241 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIRPB1O00241 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIRPB1O00241 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIRPB1O00241 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIRPB1O00241 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.5■□□□□ 0.71
SIRPB1O00241 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SIRPB1O00241 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIRPB1O00241 AC004812.2-201ENST00000611079 2094 ntBASIC19.5■□□□□ 0.71
SIRPB1O00241 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIRPB1O00241 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIRPB1O00241 ATP5G2P3-201ENST00000429083 425 ntBASIC19.49■□□□□ 0.71
SIRPB1O00241 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.49■□□□□ 0.71
SIRPB1O00241 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.49■□□□□ 0.71
SIRPB1O00241 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.49■□□□□ 0.71
SIRPB1O00241 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.49■□□□□ 0.71
SIRPB1O00241 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.48■□□□□ 0.71
SIRPB1O00241 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.48■□□□□ 0.71
SIRPB1O00241 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.48■□□□□ 0.71
SIRPB1O00241 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SIRPB1O00241 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.48■□□□□ 0.71
SIRPB1O00241 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIRPB1O00241 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
SIRPB1O00241 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIRPB1O00241 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SIRPB1O00241 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SIRPB1O00241 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIRPB1O00241 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIRPB1O00241 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SIRPB1O00241 ABCB10P4-201ENST00000566803 2184 ntBASIC19.47■□□□□ 0.71
SIRPB1O00241 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
SIRPB1O00241 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.46■□□□□ 0.71
SIRPB1O00241 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SIRPB1O00241 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.46■□□□□ 0.71
SIRPB1O00241 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SIRPB1O00241 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms