Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
SIRPB1O00241 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SIRPB1O00241 AL356512.1-201ENST00000607453 1739 ntBASIC27.83■■■□□ 2.05
SIRPB1O00241 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
SIRPB1O00241 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
SIRPB1O00241 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.59■■■□□ 2.01
SIRPB1O00241 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.54■■■□□ 2
SIRPB1O00241 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SIRPB1O00241 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.36■■□□□ 1.97
SIRPB1O00241 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SIRPB1O00241 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.11■■□□□ 1.93
SIRPB1O00241 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
SIRPB1O00241 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
SIRPB1O00241 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC26.82■■□□□ 1.88
SIRPB1O00241 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SIRPB1O00241 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
SIRPB1O00241 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
SIRPB1O00241 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.33■■□□□ 1.81
SIRPB1O00241 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SIRPB1O00241 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SIRPB1O00241 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
SIRPB1O00241 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SIRPB1O00241 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.12■■□□□ 1.77
SIRPB1O00241 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SIRPB1O00241 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SIRPB1O00241 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SIRPB1O00241 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC25.93■■□□□ 1.74
SIRPB1O00241 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SIRPB1O00241 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
SIRPB1O00241 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SIRPB1O00241 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SIRPB1O00241 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
SIRPB1O00241 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SIRPB1O00241 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SIRPB1O00241 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
SIRPB1O00241 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SIRPB1O00241 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.68■■□□□ 1.7
SIRPB1O00241 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SIRPB1O00241 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.6■■□□□ 1.69
SIRPB1O00241 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SIRPB1O00241 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SIRPB1O00241 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.38■■□□□ 1.65
SIRPB1O00241 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SIRPB1O00241 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.31■■□□□ 1.64
SIRPB1O00241 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
SIRPB1O00241 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.19■■□□□ 1.62
SIRPB1O00241 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SIRPB1O00241 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SIRPB1O00241 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
SIRPB1O00241 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.1■■□□□ 1.61
SIRPB1O00241 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SIRPB1O00241 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SIRPB1O00241 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SIRPB1O00241 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.05■■□□□ 1.6
SIRPB1O00241 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SIRPB1O00241 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SIRPB1O00241 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SIRPB1O00241 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SIRPB1O00241 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC24.94■■□□□ 1.58
SIRPB1O00241 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SIRPB1O00241 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SIRPB1O00241 INO80B-203ENST00000409917 796 ntTSL 2 BASIC24.89■■□□□ 1.58
SIRPB1O00241 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SIRPB1O00241 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SIRPB1O00241 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SIRPB1O00241 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.85■■□□□ 1.57
SIRPB1O00241 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SIRPB1O00241 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SIRPB1O00241 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SIRPB1O00241 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SIRPB1O00241 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SIRPB1O00241 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SIRPB1O00241 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SIRPB1O00241 AC015813.7-201ENST00000623294 581 ntBASIC24.62■■□□□ 1.53
SIRPB1O00241 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SIRPB1O00241 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SIRPB1O00241 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
SIRPB1O00241 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
SIRPB1O00241 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.55■■□□□ 1.52
SIRPB1O00241 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SIRPB1O00241 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.53■■□□□ 1.52
SIRPB1O00241 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SIRPB1O00241 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SIRPB1O00241 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SIRPB1O00241 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SIRPB1O00241 AC145285.7-201ENST00000614819 1539 ntBASIC24.41■■□□□ 1.5
SIRPB1O00241 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SIRPB1O00241 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.37■■□□□ 1.49
SIRPB1O00241 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SIRPB1O00241 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SIRPB1O00241 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SIRPB1O00241 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SIRPB1O00241 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SIRPB1O00241 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SIRPB1O00241 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SIRPB1O00241 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.26■■□□□ 1.47
SIRPB1O00241 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SIRPB1O00241 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.22■■□□□ 1.47
SIRPB1O00241 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SIRPB1O00241 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms