Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CHRNB2P17787 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 TIMM17BP1-201ENST00000545713 516 ntBASIC16.45■□□□□ 0.22
CHRNB2P17787 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.45■□□□□ 0.22
CHRNB2P17787 AC005498.2-205ENST00000593218 784 ntBASIC16.45■□□□□ 0.22
CHRNB2P17787 AC011467.4-201ENST00000594891 528 ntBASIC16.45■□□□□ 0.22
CHRNB2P17787 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 AC022144.1-201ENST00000602255 1580 ntBASIC16.45■□□□□ 0.22
CHRNB2P17787 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.45■□□□□ 0.22
CHRNB2P17787 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
CHRNB2P17787 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHRNB2P17787 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CHRNB2P17787 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNB2P17787 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CHRNB2P17787 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRNB2P17787 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNB2P17787 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.44■□□□□ 0.22
CHRNB2P17787 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.44■□□□□ 0.22
CHRNB2P17787 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.44■□□□□ 0.22
CHRNB2P17787 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.44■□□□□ 0.22
CHRNB2P17787 AC135586.1-201ENST00000539323 574 ntBASIC16.44■□□□□ 0.22
CHRNB2P17787 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.44■□□□□ 0.22
CHRNB2P17787 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
CHRNB2P17787 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CHRNB2P17787 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.44■□□□□ 0.22
CHRNB2P17787 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHRNB2P17787 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CHRNB2P17787 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNB2P17787 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHRNB2P17787 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNB2P17787 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRNB2P17787 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNB2P17787 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.43■□□□□ 0.22
CHRNB2P17787 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.43■□□□□ 0.22
CHRNB2P17787 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNB2P17787 GAPDHP40-201ENST00000505218 1006 ntBASIC16.43■□□□□ 0.22
CHRNB2P17787 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.43■□□□□ 0.22
CHRNB2P17787 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHRNB2P17787 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.43■□□□□ 0.22
CHRNB2P17787 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.43■□□□□ 0.22
CHRNB2P17787 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms