Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.34■□□□□ 0.05
GTF2A1P52655 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.34■□□□□ 0.05
GTF2A1P52655 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.34■□□□□ 0.05
GTF2A1P52655 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.34■□□□□ 0.05
GTF2A1P52655 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.34■□□□□ 0.05
GTF2A1P52655 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.34■□□□□ 0.05
GTF2A1P52655 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.34■□□□□ 0.05
GTF2A1P52655 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.34■□□□□ 0.05
GTF2A1P52655 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GTF2A1P52655 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.34■□□□□ 0.05
GTF2A1P52655 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GTF2A1P52655 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GTF2A1P52655 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.34■□□□□ 0.05
GTF2A1P52655 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
GTF2A1P52655 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.33■□□□□ 0.05
GTF2A1P52655 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.33■□□□□ 0.05
GTF2A1P52655 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
GTF2A1P52655 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.33■□□□□ 0.04
GTF2A1P52655 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.33■□□□□ 0.04
GTF2A1P52655 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.33■□□□□ 0.04
GTF2A1P52655 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.33■□□□□ 0.04
GTF2A1P52655 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GTF2A1P52655 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC15.33■□□□□ 0.04
GTF2A1P52655 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 KRT8P44-201ENST00000441609 1350 ntBASIC15.33■□□□□ 0.04
GTF2A1P52655 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC15.33■□□□□ 0.04
GTF2A1P52655 MTHFR-210ENST00000641407 2387 ntBASIC15.33■□□□□ 0.04
GTF2A1P52655 AC145098.2-201ENST00000623593 3026 ntBASIC15.33■□□□□ 0.04
GTF2A1P52655 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 LINC00895-201ENST00000629028 1637 ntBASIC15.32■□□□□ 0.04
GTF2A1P52655 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 AC022497.1-201ENST00000624916 3691 ntBASIC15.32■□□□□ 0.04
GTF2A1P52655 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GTF2A1P52655 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 IGHGP-201ENST00000390555 1178 ntBASIC15.32■□□□□ 0.04
GTF2A1P52655 COX5BP2-201ENST00000392354 334 ntBASIC15.32■□□□□ 0.04
GTF2A1P52655 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.32■□□□□ 0.04
GTF2A1P52655 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GTF2A1P52655 HLA-F-220ENST00000434407 884 ntBASIC15.32■□□□□ 0.04
GTF2A1P52655 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms