RNA–Protein interactions for RNA: ENST00000281496.6

VWA8-201, Transcript of von Willebrand factor A domain containing 8, humanhuman

TSL 1 (best) BASIC

Gene VWA8, Length 3,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA8-201ENST00000281496 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
VWA8-201ENST00000281496 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
VWA8-201ENST00000281496 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
VWA8-201ENST00000281496 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
VWA8-201ENST00000281496 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
VWA8-201ENST00000281496 ZCCHC6Q5VYS8 1495 aaKnown RBP23.69■■□□□ 1.38
VWA8-201ENST00000281496 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
VWA8-201ENST00000281496 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.37
VWA8-201ENST00000281496 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
VWA8-201ENST00000281496 LOC105371045A0A1W2PR82 267 aa23.32■■□□□ 1.32
VWA8-201ENST00000281496 PPARGC1BQ86YN6 1023 aaKnown RBP23.19■■□□□ 1.3
VWA8-201ENST00000281496 HRCP23327 699 aa23.18■■□□□ 1.3
VWA8-201ENST00000281496 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
VWA8-201ENST00000281496 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
VWA8-201ENST00000281496 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
VWA8-201ENST00000281496 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
VWA8-201ENST00000281496 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
VWA8-201ENST00000281496 TRIM26Q12899 539 aaPredicted RBP22.53■■□□□ 1.2
VWA8-201ENST00000281496 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
VWA8-201ENST00000281496 ABCC9O60706 1549 aa22.39■■□□□ 1.17
VWA8-201ENST00000281496 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
VWA8-201ENST00000281496 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
VWA8-201ENST00000281496 CECR2Q9BXF3 1484 aa22.24■■□□□ 1.15
VWA8-201ENST00000281496 NACADO15069 1562 aa22.06■■□□□ 1.12
VWA8-201ENST00000281496 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
VWA8-201ENST00000281496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
VWA8-201ENST00000281496 WIZO95785 1651 aa21.94■■□□□ 1.1
VWA8-201ENST00000281496 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
VWA8-201ENST00000281496 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
VWA8-201ENST00000281496 PABPN1Q86U42 306 aaKnown RBP eCLIP21.76■■□□□ 1.07
VWA8-201ENST00000281496 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
VWA8-201ENST00000281496 RANGAP1P46060 587 aaPredicted RBP21.69■■□□□ 1.06
VWA8-201ENST00000281496 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
VWA8-201ENST00000281496 SCAF1Q9H7N4 1312 aaKnown RBP21.68■■□□□ 1.06
VWA8-201ENST00000281496 UNC13AQ9UPW8 1703 aa21.64■■□□□ 1.05
VWA8-201ENST00000281496 CCDC88BA6NC98 1476 aa21.62■■□□□ 1.05
VWA8-201ENST00000281496 SOGA1O94964 1423 aa21.57■■□□□ 1.04
VWA8-201ENST00000281496 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
VWA8-201ENST00000281496 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
VWA8-201ENST00000281496 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
VWA8-201ENST00000281496 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
VWA8-201ENST00000281496 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
VWA8-201ENST00000281496 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
VWA8-201ENST00000281496 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
VWA8-201ENST00000281496 YTHDC1Q96MU7 727 aaKnown RBP21.35■■□□□ 1.01
VWA8-201ENST00000281496 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
VWA8-201ENST00000281496 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
VWA8-201ENST00000281496 SMARCA4P51532 1647 aa21.31■■□□□ 1
VWA8-201ENST00000281496 SMARCA2P51531 1590 aa21.31■■□□□ 1
VWA8-201ENST00000281496 ACIN1Q9UKV3 1341 aaKnown RBP21.26■□□□□ 0.99
VWA8-201ENST00000281496 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
VWA8-201ENST00000281496 GTF3C3Q9Y5Q9 886 aa21.24■□□□□ 0.99
VWA8-201ENST00000281496 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
VWA8-201ENST00000281496 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.97
VWA8-201ENST00000281496 APLP2Q06481 763 aa21.11■□□□□ 0.97
VWA8-201ENST00000281496 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.96
VWA8-201ENST00000281496 CENPBP07199 599 aaPredicted RBP21.06■□□□□ 0.96
VWA8-201ENST00000281496 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
VWA8-201ENST00000281496 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
VWA8-201ENST00000281496 MIER1Q8N108 512 aa21.01■□□□□ 0.95
VWA8-201ENST00000281496 CLIP1P30622 1438 aa21■□□□□ 0.95
VWA8-201ENST00000281496 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
VWA8-201ENST00000281496 ITGAEP38570 1179 aa20.96■□□□□ 0.95
VWA8-201ENST00000281496 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
VWA8-201ENST00000281496 EEA1Q15075 1411 aa20.93■□□□□ 0.94
VWA8-201ENST00000281496 PELP1Q8IZL8 1130 aaKnown RBP20.89■□□□□ 0.93
VWA8-201ENST00000281496 CEP164Q9UPV0 1460 aa20.87■□□□□ 0.93
VWA8-201ENST00000281496 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
VWA8-201ENST00000281496 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
VWA8-201ENST00000281496 KANK4Q5T7N3 995 aaPredicted RBP20.84■□□□□ 0.93
VWA8-201ENST00000281496 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
VWA8-201ENST00000281496 ATP1B4Q9UN42 357 aaPredicted RBP20.7■□□□□ 0.9
VWA8-201ENST00000281496 KIF21BO75037 1637 aa20.68■□□□□ 0.9
VWA8-201ENST00000281496 P3H3Q8IVL6 736 aa20.64■□□□□ 0.9
VWA8-201ENST00000281496 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
VWA8-201ENST00000281496 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
VWA8-201ENST00000281496 KCNH8Q96L42 1107 aa20.5■□□□□ 0.87
VWA8-201ENST00000281496 HIRIP3Q9BW71 556 aaPredicted RBP20.49■□□□□ 0.87
VWA8-201ENST00000281496 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
VWA8-201ENST00000281496 FAM50AQ14320 339 aaKnown RBP20.48■□□□□ 0.87
VWA8-201ENST00000281496 HMGXB3Q12766 1538 aa20.45■□□□□ 0.86
VWA8-201ENST00000281496 CUX1P39880 1505 aa20.44■□□□□ 0.86
VWA8-201ENST00000281496 PRXQ9BXM0 1461 aa20.43■□□□□ 0.86
VWA8-201ENST00000281496 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
VWA8-201ENST00000281496 SIN3AQ96ST3 1273 aa20.41■□□□□ 0.86
VWA8-201ENST00000281496 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
VWA8-201ENST00000281496 BCANQ96GW7 911 aa20.34■□□□□ 0.85
VWA8-201ENST00000281496 CUX2O14529 1486 aa20.34■□□□□ 0.85
VWA8-201ENST00000281496 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
VWA8-201ENST00000281496 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
VWA8-201ENST00000281496 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
VWA8-201ENST00000281496 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
VWA8-201ENST00000281496 RAB3GAP2Q9H2M9 1393 aa20.3■□□□□ 0.84
VWA8-201ENST00000281496 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
VWA8-201ENST00000281496 SUPT16HQ9Y5B9 1047 aaKnown RBP20.26■□□□□ 0.83
VWA8-201ENST00000281496 IGF1RP08069 1367 aa20.26■□□□□ 0.83
VWA8-201ENST00000281496 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
VWA8-201ENST00000281496 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
VWA8-201ENST00000281496 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
VWA8-201ENST00000281496 CFTRP13569 1480 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms