RNA–Protein interactions for RNA: ENST00000292641.3

SCGB3A1-201, Transcript of secretoglobin family 3A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCGB3A1, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1-201ENST00000292641 NISCHQ9Y2I1 1504 aa46.13■■■■■ 4.98
SCGB3A1-201ENST00000292641 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
SCGB3A1-201ENST00000292641 ABCC9O60706 1549 aa40.77■■■■■ 4.12
SCGB3A1-201ENST00000292641 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
SCGB3A1-201ENST00000292641 NACADO15069 1562 aa38.79■■■■□ 3.8
SCGB3A1-201ENST00000292641 DCAF8L2P0C7V8 631 aa38.63■■■■□ 3.77
SCGB3A1-201ENST00000292641 MYO15BQ96JP2 1530 aa38.5■■■■□ 3.75
SCGB3A1-201ENST00000292641 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
SCGB3A1-201ENST00000292641 DCAF1Q9Y4B6 1507 aa38.2■■■■□ 3.71
SCGB3A1-201ENST00000292641 UNC13AQ9UPW8 1703 aa38.04■■■■□ 3.68
SCGB3A1-201ENST00000292641 DNAJC5BQ9UF47 199 aa37.97■■■■□ 3.67
SCGB3A1-201ENST00000292641 PABPN1Q86U42 306 aaKnown RBP eCLIP37.88■■■■□ 3.65
SCGB3A1-201ENST00000292641 BICRAQ9NZM4 1560 aa37.74■■■■□ 3.63
SCGB3A1-201ENST00000292641 SCRIBQ14160 1630 aa37.47■■■■□ 3.59
SCGB3A1-201ENST00000292641 SHROOM4Q9ULL8 1493 aa37.46■■■■□ 3.59
SCGB3A1-201ENST00000292641 CC2D2AQ9P2K1 1620 aa36.88■■■■□ 3.5
SCGB3A1-201ENST00000292641 EIF4G1Q04637 1599 aaKnown RBP36.87■■■■□ 3.49
SCGB3A1-201ENST00000292641 CECR2Q9BXF3 1484 aa36.75■■■■□ 3.47
SCGB3A1-201ENST00000292641 SMARCA4P51532 1647 aa35.86■■■■□ 3.33
SCGB3A1-201ENST00000292641 NCAPD3P42695 1498 aa35.8■■■■□ 3.32
SCGB3A1-201ENST00000292641 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
SCGB3A1-201ENST00000292641 ATAD2BQ9ULI0 1458 aa35.74■■■■□ 3.31
SCGB3A1-201ENST00000292641 SMARCA2P51531 1590 aa35.7■■■■□ 3.31
SCGB3A1-201ENST00000292641 HMGXB3Q12766 1538 aa35.57■■■■□ 3.29
SCGB3A1-201ENST00000292641 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
SCGB3A1-201ENST00000292641 MROH2BQ7Z745 1585 aa35.53■■■■□ 3.28
SCGB3A1-201ENST00000292641 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
SCGB3A1-201ENST00000292641 ERCC6Q03468 1493 aa35.28■■■■□ 3.24
SCGB3A1-201ENST00000292641 CUX2O14529 1486 aa35.22■■■■□ 3.23
SCGB3A1-201ENST00000292641 WIZO95785 1651 aa35.14■■■■□ 3.22
SCGB3A1-201ENST00000292641 RSF1Q96T23 1441 aaPredicted RBP35.02■■■■□ 3.2
SCGB3A1-201ENST00000292641 NESP48681 1621 aa35.02■■■■□ 3.2
SCGB3A1-201ENST00000292641 LAMC3Q9Y6N6 1575 aa34.96■■■■□ 3.19
SCGB3A1-201ENST00000292641 DNAJC5Q9H3Z4 198 aa34.91■■■■□ 3.18
SCGB3A1-201ENST00000292641 THOC2Q8NI27 1593 aaKnown RBP34.76■■■■□ 3.16
SCGB3A1-201ENST00000292641 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
SCGB3A1-201ENST00000292641 CADPSQ9ULU8 1353 aa34.73■■■■□ 3.15
SCGB3A1-201ENST00000292641 PDS5BQ9NTI5 1447 aa34.72■■■■□ 3.15
SCGB3A1-201ENST00000292641 KIF21AQ7Z4S6 1674 aa34.66■■■■□ 3.14
SCGB3A1-201ENST00000292641 CFTRP13569 1480 aa34.46■■■■□ 3.11
SCGB3A1-201ENST00000292641 MRC2Q9UBG0 1479 aa34.41■■■■□ 3.1
SCGB3A1-201ENST00000292641 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
SCGB3A1-201ENST00000292641 WDR62O43379 1518 aa34.34■■■■□ 3.09
SCGB3A1-201ENST00000292641 CEP164Q9UPV0 1460 aa34.32■■■■□ 3.08
SCGB3A1-201ENST00000292641 FANCD2Q9BXW9 1451 aa34.3■■■■□ 3.08
SCGB3A1-201ENST00000292641 PRDM2Q13029 1718 aa34.21■■■■□ 3.07
SCGB3A1-201ENST00000292641 URB2Q14146 1524 aaKnown RBP33.97■■■■□ 3.03
SCGB3A1-201ENST00000292641 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
SCGB3A1-201ENST00000292641 ABCC8Q09428 1581 aa33.77■■■■□ 3
SCGB3A1-201ENST00000292641 TOPBP1Q92547 1522 aa33.73■■■□□ 2.99
SCGB3A1-201ENST00000292641 DNMBPQ6XZF7 1577 aa33.66■■■□□ 2.98
SCGB3A1-201ENST00000292641 IFT140Q96RY7 1462 aa33.63■■■□□ 2.97
SCGB3A1-201ENST00000292641 OSCARQ8IYS5 282 aa33.52■■■□□ 2.96
SCGB3A1-201ENST00000292641 ZNF608Q9ULD9 1512 aaPredicted RBP33.44■■■□□ 2.94
SCGB3A1-201ENST00000292641 POLA1P09884 1462 aaPredicted RBP33.41■■■□□ 2.94
SCGB3A1-201ENST00000292641 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
SCGB3A1-201ENST00000292641 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.94
SCGB3A1-201ENST00000292641 EIF4G3O43432 1585 aaKnown RBP33.38■■■□□ 2.93
SCGB3A1-201ENST00000292641 CUX1P39880 1505 aa33.34■■■□□ 2.93
SCGB3A1-201ENST00000292641 SOGA1O94964 1423 aa33.29■■■□□ 2.92
SCGB3A1-201ENST00000292641 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
SCGB3A1-201ENST00000292641 RAD54L2Q9Y4B4 1467 aa33.25■■■□□ 2.91
SCGB3A1-201ENST00000292641 AQRO60306 1485 aaKnown RBP eCLIP33.23■■■□□ 2.91
SCGB3A1-201ENST00000292641 WDR97A6NE52 1622 aa33.15■■■□□ 2.9
SCGB3A1-201ENST00000292641 TDRD9Q8NDG6 1382 aaKnown RBP33.11■■■□□ 2.89
SCGB3A1-201ENST00000292641 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
SCGB3A1-201ENST00000292641 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
SCGB3A1-201ENST00000292641 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
SCGB3A1-201ENST00000292641 CHD1O14646 1710 aa33.08■■■□□ 2.89
SCGB3A1-201ENST00000292641 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
SCGB3A1-201ENST00000292641 ARHGEF11O15085 1522 aa33.02■■■□□ 2.88
SCGB3A1-201ENST00000292641 TOP2BQ02880 1626 aa33.01■■■□□ 2.87
SCGB3A1-201ENST00000292641 BIVM-ERCC5R4GMW8 1640 aa33.01■■■□□ 2.87
SCGB3A1-201ENST00000292641 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
SCGB3A1-201ENST00000292641 SYNJ1O43426 1573 aa32.94■■■□□ 2.86
SCGB3A1-201ENST00000292641 GRIN2BQ13224 1484 aa32.93■■■□□ 2.86
SCGB3A1-201ENST00000292641 FBLN2P98095 1184 aa32.9■■■□□ 2.86
SCGB3A1-201ENST00000292641 GAPVD1Q14C86 1478 aa32.89■■■□□ 2.86
SCGB3A1-201ENST00000292641 SNAPC4Q5SXM2 1469 aa32.89■■■□□ 2.86
SCGB3A1-201ENST00000292641 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
SCGB3A1-201ENST00000292641 ABCA5Q8WWZ7 1642 aa32.85■■■□□ 2.85
SCGB3A1-201ENST00000292641 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
SCGB3A1-201ENST00000292641 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
SCGB3A1-201ENST00000292641 SYNJ2O15056 1496 aa32.75■■■□□ 2.83
SCGB3A1-201ENST00000292641 CLASP1Q7Z460 1538 aa32.72■■■□□ 2.83
SCGB3A1-201ENST00000292641 ARAP1Q96P48 1450 aa32.69■■■□□ 2.82
SCGB3A1-201ENST00000292641 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
SCGB3A1-201ENST00000292641 ERICH3Q5RHP9 1530 aa32.58■■■□□ 2.81
SCGB3A1-201ENST00000292641 ADAMTS12P58397 1594 aa32.53■■■□□ 2.8
SCGB3A1-201ENST00000292641 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
SCGB3A1-201ENST00000292641 GRIN2AQ12879 1464 aa32.49■■■□□ 2.79
SCGB3A1-201ENST00000292641 NUP160Q12769 1436 aa32.38■■■□□ 2.77
SCGB3A1-201ENST00000292641 KIF27Q86VH2 1401 aa32.37■■■□□ 2.77
SCGB3A1-201ENST00000292641 CEP170Q5SW79 1584 aa32.34■■■□□ 2.77
SCGB3A1-201ENST00000292641 TRHP20396 242 aaPredicted RBP32.3■■■□□ 2.76
SCGB3A1-201ENST00000292641 IGF1RP08069 1367 aa32.3■■■□□ 2.76
SCGB3A1-201ENST00000292641 CUL7Q14999 1698 aa32.22■■■□□ 2.75
SCGB3A1-201ENST00000292641 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
SCGB3A1-201ENST00000292641 ERCC6L2Q5T890 1561 aa32.11■■■□□ 2.73
SCGB3A1-201ENST00000292641 CARMIL1Q5VZK9 1371 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms