Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HIST1H1DP16402 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HIST1H1DP16402 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 AL671277.1-201ENST00000429656 993 ntBASIC13.25□□□□□ -0.29
HIST1H1DP16402 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 AL662844.1-201ENST00000546340 181 ntBASIC13.25□□□□□ -0.29
HIST1H1DP16402 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 AC011467.4-201ENST00000594891 528 ntBASIC13.25□□□□□ -0.29
HIST1H1DP16402 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 REXO1L2P-201ENST00000425429 2069 ntBASIC13.25□□□□□ -0.29
HIST1H1DP16402 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST1H1DP16402 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST1H1DP16402 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 AZGP1P1-201ENST00000411909 902 ntBASIC13.24□□□□□ -0.29
HIST1H1DP16402 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.24□□□□□ -0.29
HIST1H1DP16402 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 FAM86C2P-203ENST00000528684 1004 ntBASIC13.24□□□□□ -0.29
HIST1H1DP16402 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 AP000842.3-202ENST00000569238 1080 ntBASIC13.24□□□□□ -0.29
HIST1H1DP16402 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.24□□□□□ -0.29
HIST1H1DP16402 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST1H1DP16402 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST1H1DP16402 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms