Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR3DP05423 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR3DP05423 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR3DP05423 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR3DP05423 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR3DP05423 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR3DP05423 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
POLR3DP05423 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 AP002414.2-201ENST00000591780 3365 ntBASIC18.59■□□□□ 0.57
POLR3DP05423 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
POLR3DP05423 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 AC079776.1-201ENST00000401540 1152 ntBASIC18.59■□□□□ 0.57
POLR3DP05423 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR3DP05423 ACA64.2-201ENST00000459014 129 ntBASIC18.59■□□□□ 0.57
POLR3DP05423 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR3DP05423 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR3DP05423 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.59■□□□□ 0.57
POLR3DP05423 AC124283.3-201ENST00000570869 594 ntBASIC18.59■□□□□ 0.57
POLR3DP05423 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR3DP05423 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
POLR3DP05423 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
POLR3DP05423 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
POLR3DP05423 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR3DP05423 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
POLR3DP05423 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.58■□□□□ 0.57
POLR3DP05423 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
POLR3DP05423 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR3DP05423 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR3DP05423 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
POLR3DP05423 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR3DP05423 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
POLR3DP05423 CICP13-201ENST00000422015 2789 ntBASIC18.58■□□□□ 0.56
POLR3DP05423 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
POLR3DP05423 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
POLR3DP05423 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
POLR3DP05423 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
POLR3DP05423 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR3DP05423 TDH-203ENST00000531764 1110 ntBASIC18.58■□□□□ 0.56
POLR3DP05423 ENPP7P5-201ENST00000541031 1031 ntBASIC18.58■□□□□ 0.56
POLR3DP05423 AC017083.2-201ENST00000608069 979 ntBASIC18.58■□□□□ 0.56
POLR3DP05423 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.58■□□□□ 0.56
POLR3DP05423 RPSAP52-203ENST00000622976 1023 ntBASIC18.58■□□□□ 0.56
POLR3DP05423 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
POLR3DP05423 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR3DP05423 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
POLR3DP05423 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR3DP05423 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
POLR3DP05423 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
POLR3DP05423 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.58■□□□□ 0.56
POLR3DP05423 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
POLR3DP05423 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
POLR3DP05423 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.58■□□□□ 0.56
POLR3DP05423 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.58■□□□□ 0.56
POLR3DP05423 AC144831.1-201ENST00000573312 2656 ntBASIC18.57■□□□□ 0.56
POLR3DP05423 AC092850.2-201ENST00000623821 2697 ntBASIC18.57■□□□□ 0.56
POLR3DP05423 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR3DP05423 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms