RNA–Protein interactions for RNA: ENST00000380585.1

TMEM239-202, Transcript of transmembrane protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM239, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM239-202ENST00000380585 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
TMEM239-202ENST00000380585 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
TMEM239-202ENST00000380585 ABCC9O60706 1549 aa30.81■■■□□ 2.52
TMEM239-202ENST00000380585 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
TMEM239-202ENST00000380585 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
TMEM239-202ENST00000380585 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
TMEM239-202ENST00000380585 DCAF8L2P0C7V8 631 aa29.92■■■□□ 2.38
TMEM239-202ENST00000380585 NACADO15069 1562 aa29.79■■■□□ 2.36
TMEM239-202ENST00000380585 RB1CC1Q8TDY2 1594 aa29.74■■■□□ 2.35
TMEM239-202ENST00000380585 SHROOM4Q9ULL8 1493 aa29.33■■■□□ 2.29
TMEM239-202ENST00000380585 SCRIBQ14160 1630 aa29.23■■■□□ 2.27
TMEM239-202ENST00000380585 UNC13AQ9UPW8 1703 aa28.98■■■□□ 2.23
TMEM239-202ENST00000380585 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
TMEM239-202ENST00000380585 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
TMEM239-202ENST00000380585 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.1
TMEM239-202ENST00000380585 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
TMEM239-202ENST00000380585 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
TMEM239-202ENST00000380585 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
TMEM239-202ENST00000380585 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
TMEM239-202ENST00000380585 SMARCA4P51532 1647 aa28.06■■■□□ 2.08
TMEM239-202ENST00000380585 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
TMEM239-202ENST00000380585 MROH2BQ7Z745 1585 aa28.05■■■□□ 2.08
TMEM239-202ENST00000380585 CC2D2AQ9P2K1 1620 aa27.87■■■□□ 2.05
TMEM239-202ENST00000380585 WIZO95785 1651 aa27.83■■■□□ 2.05
TMEM239-202ENST00000380585 PEG3Q9GZU2 1588 aa27.76■■■□□ 2.03
TMEM239-202ENST00000380585 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
TMEM239-202ENST00000380585 TOP2AP11388 1531 aaKnown RBP27.61■■■□□ 2.01
TMEM239-202ENST00000380585 ATAD2BQ9ULI0 1458 aa27.6■■■□□ 2.01
TMEM239-202ENST00000380585 NCAPD3P42695 1498 aa27.5■■□□□ 1.99
TMEM239-202ENST00000380585 BAZ1BQ9UIG0 1483 aaKnown RBP27.46■■□□□ 1.99
TMEM239-202ENST00000380585 HMGXB3Q12766 1538 aa27.45■■□□□ 1.98
TMEM239-202ENST00000380585 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
TMEM239-202ENST00000380585 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
TMEM239-202ENST00000380585 CFTRP13569 1480 aa26.74■■□□□ 1.87
TMEM239-202ENST00000380585 PRDM2Q13029 1718 aa26.74■■□□□ 1.87
TMEM239-202ENST00000380585 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
TMEM239-202ENST00000380585 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
TMEM239-202ENST00000380585 NESP48681 1621 aa26.7■■□□□ 1.86
TMEM239-202ENST00000380585 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
TMEM239-202ENST00000380585 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
TMEM239-202ENST00000380585 ABCC8Q09428 1581 aa26.56■■□□□ 1.84
TMEM239-202ENST00000380585 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
TMEM239-202ENST00000380585 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
TMEM239-202ENST00000380585 FANCD2Q9BXW9 1451 aa26.41■■□□□ 1.82
TMEM239-202ENST00000380585 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
TMEM239-202ENST00000380585 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
TMEM239-202ENST00000380585 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
TMEM239-202ENST00000380585 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
TMEM239-202ENST00000380585 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
TMEM239-202ENST00000380585 CUX1P39880 1505 aa26.27■■□□□ 1.8
TMEM239-202ENST00000380585 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
TMEM239-202ENST00000380585 CUX2O14529 1486 aa26.24■■□□□ 1.79
TMEM239-202ENST00000380585 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
TMEM239-202ENST00000380585 DNMBPQ6XZF7 1577 aa26.18■■□□□ 1.78
TMEM239-202ENST00000380585 WDR62O43379 1518 aa26.14■■□□□ 1.77
TMEM239-202ENST00000380585 TOPBP1Q92547 1522 aa26.09■■□□□ 1.77
TMEM239-202ENST00000380585 URB2Q14146 1524 aaKnown RBP26.08■■□□□ 1.77
TMEM239-202ENST00000380585 EEA1Q15075 1411 aa26.03■■□□□ 1.76
TMEM239-202ENST00000380585 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
TMEM239-202ENST00000380585 SOGA1O94964 1423 aa25.97■■□□□ 1.75
TMEM239-202ENST00000380585 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
TMEM239-202ENST00000380585 FAM9AQ8IZU1 332 aaPredicted RBP25.91■■□□□ 1.74
TMEM239-202ENST00000380585 RUSC2Q8N2Y8 1516 aa25.87■■□□□ 1.73
TMEM239-202ENST00000380585 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
TMEM239-202ENST00000380585 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
TMEM239-202ENST00000380585 ABCA10Q8WWZ4 1543 aa25.82■■□□□ 1.72
TMEM239-202ENST00000380585 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
TMEM239-202ENST00000380585 IFT140Q96RY7 1462 aa25.78■■□□□ 1.72
TMEM239-202ENST00000380585 CSRNP3Q8WYN3 585 aa25.76■■□□□ 1.71
TMEM239-202ENST00000380585 TARBP1Q13395 1621 aaKnown RBP25.76■■□□□ 1.71
TMEM239-202ENST00000380585 KIF21BO75037 1637 aa25.71■■□□□ 1.71
TMEM239-202ENST00000380585 ABCA5Q8WWZ7 1642 aa25.67■■□□□ 1.7
TMEM239-202ENST00000380585 LOC105371045A0A1W2PR82 267 aa25.65■■□□□ 1.7
TMEM239-202ENST00000380585 GOLGA3Q08378 1498 aa25.62■■□□□ 1.69
TMEM239-202ENST00000380585 ZNF608Q9ULD9 1512 aaPredicted RBP25.59■■□□□ 1.69
TMEM239-202ENST00000380585 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
TMEM239-202ENST00000380585 PRXQ9BXM0 1461 aa25.58■■□□□ 1.69
TMEM239-202ENST00000380585 GAPVD1Q14C86 1478 aa25.57■■□□□ 1.68
TMEM239-202ENST00000380585 IGF1RP08069 1367 aa25.56■■□□□ 1.68
TMEM239-202ENST00000380585 CUL7Q14999 1698 aa25.55■■□□□ 1.68
TMEM239-202ENST00000380585 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
TMEM239-202ENST00000380585 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
TMEM239-202ENST00000380585 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.67
TMEM239-202ENST00000380585 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
TMEM239-202ENST00000380585 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
TMEM239-202ENST00000380585 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
TMEM239-202ENST00000380585 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
TMEM239-202ENST00000380585 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
TMEM239-202ENST00000380585 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
TMEM239-202ENST00000380585 UBTFP17480 764 aaKnown RBP25.39■■□□□ 1.66
TMEM239-202ENST00000380585 ADAMTS12P58397 1594 aa25.36■■□□□ 1.65
TMEM239-202ENST00000380585 FHAD1B1AJZ9 1412 aa25.3■■□□□ 1.64
TMEM239-202ENST00000380585 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
TMEM239-202ENST00000380585 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
TMEM239-202ENST00000380585 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
TMEM239-202ENST00000380585 DNAJC5Q9H3Z4 198 aa25.24■■□□□ 1.63
TMEM239-202ENST00000380585 OSCARQ8IYS5 282 aa25.23■■□□□ 1.63
TMEM239-202ENST00000380585 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
TMEM239-202ENST00000380585 FBLN2P98095 1184 aa25.18■■□□□ 1.62
TMEM239-202ENST00000380585 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms