Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP6V0A1Q93050 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 AL355864.2-201ENST00000447420 863 ntBASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 AC009486.1-201ENST00000569860 813 ntBASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 CLUHP6-201ENST00000580789 941 ntBASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP6V0A1Q93050 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 FAM86MP-201ENST00000340703 885 ntBASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 BAATP1-201ENST00000412284 1225 ntBASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 AC026410.3-201ENST00000514280 936 ntBASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 AC092127.1-201ENST00000567093 3455 ntBASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 CICP13-201ENST00000422015 2789 ntBASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ATP6V0A1Q93050 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
ATP6V0A1Q93050 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP6V0A1Q93050 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms