RNA–Protein interactions for RNA: ENST00000380842.4

POMP-201, Transcript of proteasome maturation protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POMP, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POMP-201ENST00000380842 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
POMP-201ENST00000380842 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
POMP-201ENST00000380842 ABCC9O60706 1549 aa34.61■■■■□ 3.13
POMP-201ENST00000380842 RB1CC1Q8TDY2 1594 aa32.94■■■□□ 2.86
POMP-201ENST00000380842 NACADO15069 1562 aa32.69■■■□□ 2.82
POMP-201ENST00000380842 DNAJC5BQ9UF47 199 aa32.51■■■□□ 2.79
POMP-201ENST00000380842 UNC13AQ9UPW8 1703 aa32.41■■■□□ 2.78
POMP-201ENST00000380842 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
POMP-201ENST00000380842 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
POMP-201ENST00000380842 BICRAQ9NZM4 1560 aa32.11■■■□□ 2.73
POMP-201ENST00000380842 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
POMP-201ENST00000380842 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
POMP-201ENST00000380842 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
POMP-201ENST00000380842 SHROOM4Q9ULL8 1493 aa31.6■■■□□ 2.65
POMP-201ENST00000380842 SCRIBQ14160 1630 aa31.54■■■□□ 2.64
POMP-201ENST00000380842 CC2D2AQ9P2K1 1620 aa31.35■■■□□ 2.61
POMP-201ENST00000380842 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.59
POMP-201ENST00000380842 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
POMP-201ENST00000380842 CECR2Q9BXF3 1484 aa31.18■■■□□ 2.58
POMP-201ENST00000380842 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
POMP-201ENST00000380842 SMARCA4P51532 1647 aa30.09■■■□□ 2.41
POMP-201ENST00000380842 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
POMP-201ENST00000380842 HMGXB3Q12766 1538 aa30.02■■■□□ 2.4
POMP-201ENST00000380842 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
POMP-201ENST00000380842 CUX2O14529 1486 aa29.9■■■□□ 2.38
POMP-201ENST00000380842 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
POMP-201ENST00000380842 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
POMP-201ENST00000380842 ERCC6Q03468 1493 aa29.84■■■□□ 2.37
POMP-201ENST00000380842 PEG3Q9GZU2 1588 aa29.82■■■□□ 2.36
POMP-201ENST00000380842 NESP48681 1621 aa29.75■■■□□ 2.35
POMP-201ENST00000380842 BAZ1BQ9UIG0 1483 aaKnown RBP29.74■■■□□ 2.35
POMP-201ENST00000380842 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
POMP-201ENST00000380842 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
POMP-201ENST00000380842 LAMC3Q9Y6N6 1575 aa29.54■■■□□ 2.32
POMP-201ENST00000380842 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
POMP-201ENST00000380842 WIZO95785 1651 aa29.32■■■□□ 2.28
POMP-201ENST00000380842 CHIC1Q5VXU3 224 aa29.31■■■□□ 2.28
POMP-201ENST00000380842 PDS5BQ9NTI5 1447 aa29.22■■■□□ 2.27
POMP-201ENST00000380842 CADPSQ9ULU8 1353 aa29.14■■■□□ 2.26
POMP-201ENST00000380842 WDR62O43379 1518 aa29.11■■■□□ 2.25
POMP-201ENST00000380842 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
POMP-201ENST00000380842 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
POMP-201ENST00000380842 TOP2AP11388 1531 aaKnown RBP28.93■■■□□ 2.22
POMP-201ENST00000380842 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
POMP-201ENST00000380842 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
POMP-201ENST00000380842 CFTRP13569 1480 aa28.88■■■□□ 2.21
POMP-201ENST00000380842 PRDM2Q13029 1718 aa28.79■■■□□ 2.2
POMP-201ENST00000380842 URB2Q14146 1524 aaKnown RBP28.73■■■□□ 2.19
POMP-201ENST00000380842 CCDC88BA6NC98 1476 aa28.51■■■□□ 2.15
POMP-201ENST00000380842 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
POMP-201ENST00000380842 TOPBP1Q92547 1522 aa28.37■■■□□ 2.13
POMP-201ENST00000380842 ZNF608Q9ULD9 1512 aaPredicted RBP28.37■■■□□ 2.13
POMP-201ENST00000380842 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
POMP-201ENST00000380842 EIF4G3O43432 1585 aaKnown RBP28.31■■■□□ 2.12
POMP-201ENST00000380842 DNMBPQ6XZF7 1577 aa28.28■■■□□ 2.12
POMP-201ENST00000380842 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
POMP-201ENST00000380842 RIMBP3CA6NJZ7 1639 aa28.24■■■□□ 2.11
POMP-201ENST00000380842 RIMBP3BA6NNM3 1639 aa28.24■■■□□ 2.11
POMP-201ENST00000380842 RIMBP3Q9UFD9 1639 aa28.24■■■□□ 2.11
POMP-201ENST00000380842 TARBP1Q13395 1621 aaKnown RBP28.21■■■□□ 2.11
POMP-201ENST00000380842 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
POMP-201ENST00000380842 CHD1O14646 1710 aa28.14■■■□□ 2.09
POMP-201ENST00000380842 ARHGEF11O15085 1522 aa28.1■■■□□ 2.09
POMP-201ENST00000380842 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
POMP-201ENST00000380842 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.079e-7■■■■■ 31.2
POMP-201ENST00000380842 RAD54L2Q9Y4B4 1467 aa27.92■■■□□ 2.06
POMP-201ENST00000380842 WDR97A6NE52 1622 aa27.89■■■□□ 2.06
POMP-201ENST00000380842 CUX1P39880 1505 aa27.88■■■□□ 2.05
POMP-201ENST00000380842 FGD5Q6ZNL6 1462 aa27.87■■■□□ 2.05
POMP-201ENST00000380842 ARAP1Q96P48 1450 aa27.83■■■□□ 2.05
POMP-201ENST00000380842 SOGA1O94964 1423 aa27.8■■■□□ 2.04
POMP-201ENST00000380842 SNAPC4Q5SXM2 1469 aa27.8■■■□□ 2.04
POMP-201ENST00000380842 CLASP1Q7Z460 1538 aa27.78■■■□□ 2.04
POMP-201ENST00000380842 TDRD9Q8NDG6 1382 aaKnown RBP27.78■■■□□ 2.04
POMP-201ENST00000380842 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
POMP-201ENST00000380842 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.02
POMP-201ENST00000380842 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
POMP-201ENST00000380842 GRIN2BQ13224 1484 aa27.65■■■□□ 2.02
POMP-201ENST00000380842 FBLN2P98095 1184 aa27.65■■■□□ 2.02
POMP-201ENST00000380842 ABCA5Q8WWZ7 1642 aa27.64■■■□□ 2.02
POMP-201ENST00000380842 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.01
POMP-201ENST00000380842 SYNJ2O15056 1496 aa27.6■■■□□ 2.01
POMP-201ENST00000380842 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
POMP-201ENST00000380842 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
POMP-201ENST00000380842 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
POMP-201ENST00000380842 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
POMP-201ENST00000380842 ADAMTS12P58397 1594 aa27.43■■□□□ 1.98
POMP-201ENST00000380842 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
POMP-201ENST00000380842 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
POMP-201ENST00000380842 CEP170Q5SW79 1584 aa27.33■■□□□ 1.97
POMP-201ENST00000380842 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
POMP-201ENST00000380842 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
POMP-201ENST00000380842 SUPT5HO00267 1087 aaKnown RBP27.31■■□□□ 1.96
POMP-201ENST00000380842 TRHP20396 242 aaPredicted RBP27.3■■□□□ 1.96
POMP-201ENST00000380842 NUP160Q12769 1436 aa27.28■■□□□ 1.96
POMP-201ENST00000380842 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
POMP-201ENST00000380842 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
POMP-201ENST00000380842 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
POMP-201ENST00000380842 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
POMP-201ENST00000380842 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms