Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCK1P35558 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.53■□□□□ 0.24
PCK1P35558 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 AC013268.4-201ENST00000637413 2228 ntBASIC16.53■□□□□ 0.24
PCK1P35558 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCK1P35558 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCK1P35558 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCK1P35558 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCK1P35558 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCK1P35558 AL607033.1-201ENST00000623900 1599 ntBASIC16.52■□□□□ 0.24
PCK1P35558 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.52■□□□□ 0.24
PCK1P35558 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.52■□□□□ 0.24
PCK1P35558 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCK1P35558 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.52■□□□□ 0.24
PCK1P35558 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCK1P35558 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.52■□□□□ 0.24
PCK1P35558 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 AC109322.1-201ENST00000524499 1264 ntBASIC16.52■□□□□ 0.24
PCK1P35558 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
PCK1P35558 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.52■□□□□ 0.24
PCK1P35558 AC023511.2-201ENST00000618803 211 ntBASIC16.52■□□□□ 0.24
PCK1P35558 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.52■□□□□ 0.24
PCK1P35558 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCK1P35558 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.52■□□□□ 0.23
PCK1P35558 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
PCK1P35558 OR2I1P-209ENST00000641730 5365 ntBASIC16.52■□□□□ 0.23
PCK1P35558 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCK1P35558 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.51■□□□□ 0.23
PCK1P35558 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 AC006058.4-201ENST00000624016 1670 ntBASIC16.51■□□□□ 0.23
PCK1P35558 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCK1P35558 AL139400.1-201ENST00000366220 510 ntBASIC16.51■□□□□ 0.23
PCK1P35558 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 TSEN15P1-201ENST00000423257 515 ntBASIC16.51■□□□□ 0.23
PCK1P35558 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.51■□□□□ 0.23
PCK1P35558 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms