Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.39■■■■□ 3.26
PCK1P35558 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
PCK1P35558 AL356512.1-201ENST00000607453 1739 ntBASIC34.68■■■■□ 3.14
PCK1P35558 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
PCK1P35558 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.42■■■■□ 3.1
PCK1P35558 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
PCK1P35558 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
PCK1P35558 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.18■■■■□ 3.06
PCK1P35558 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.15■■■■□ 3.06
PCK1P35558 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.08■■■■□ 3.05
PCK1P35558 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.74■■■□□ 2.99
PCK1P35558 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.69■■■□□ 2.98
PCK1P35558 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.63■■■□□ 2.97
PCK1P35558 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
PCK1P35558 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
PCK1P35558 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.12■■■□□ 2.89
PCK1P35558 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
PCK1P35558 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
PCK1P35558 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.74■■■□□ 2.83
PCK1P35558 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.71■■■□□ 2.83
PCK1P35558 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.64■■■□□ 2.82
PCK1P35558 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
PCK1P35558 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
PCK1P35558 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
PCK1P35558 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
PCK1P35558 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
PCK1P35558 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.37■■■□□ 2.77
PCK1P35558 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
PCK1P35558 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
PCK1P35558 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
PCK1P35558 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
PCK1P35558 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PCK1P35558 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PCK1P35558 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCK1P35558 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.05■■■□□ 2.72
PCK1P35558 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.96■■■□□ 2.71
PCK1P35558 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCK1P35558 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.88■■■□□ 2.69
PCK1P35558 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PCK1P35558 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCK1P35558 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PCK1P35558 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.64■■■□□ 2.65
PCK1P35558 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
PCK1P35558 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCK1P35558 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PCK1P35558 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.34■■■□□ 2.61
PCK1P35558 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
PCK1P35558 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCK1P35558 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PCK1P35558 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.28■■■□□ 2.6
PCK1P35558 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCK1P35558 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCK1P35558 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.24■■■□□ 2.59
PCK1P35558 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCK1P35558 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCK1P35558 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.14■■■□□ 2.58
PCK1P35558 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.11■■■□□ 2.57
PCK1P35558 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PCK1P35558 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PCK1P35558 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PCK1P35558 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.06■■■□□ 2.56
PCK1P35558 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCK1P35558 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PCK1P35558 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.94■■■□□ 2.54
PCK1P35558 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PCK1P35558 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCK1P35558 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCK1P35558 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
PCK1P35558 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
PCK1P35558 AC015813.7-201ENST00000623294 581 ntBASIC30.82■■■□□ 2.52
PCK1P35558 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCK1P35558 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCK1P35558 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PCK1P35558 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PCK1P35558 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
PCK1P35558 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.61■■■□□ 2.49
PCK1P35558 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
PCK1P35558 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
PCK1P35558 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PCK1P35558 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
PCK1P35558 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PCK1P35558 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PCK1P35558 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PCK1P35558 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.41■■■□□ 2.46
PCK1P35558 AC145285.7-201ENST00000614819 1539 ntBASIC30.39■■■□□ 2.46
PCK1P35558 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PCK1P35558 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.38■■■□□ 2.45
PCK1P35558 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCK1P35558 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCK1P35558 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.3■■■□□ 2.44
PCK1P35558 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PCK1P35558 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCK1P35558 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCK1P35558 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCK1P35558 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCK1P35558 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PCK1P35558 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.22■■■□□ 2.43
PCK1P35558 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCK1P35558 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCK1P35558 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms