Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TSPAN14-201ENST00000265450 2588 ntTSL 216.63■□□□□ 0.251e-11■□□□□ 10.8
RPS3P23396 COL9A3-208ENST00000469802 680 ntTSL 215.72■□□□□ 0.113e-14■□□□□ 10.8
RPS3P23396 RALY-209ENST00000489384 227 ntTSL 36.63□□□□□ -1.351e-11■□□□□ 10.8
RPS3P23396 MYC-204ENST00000520751 577 ntTSL 318.53■□□□□ 0.567e-16■□□□□ 10.8
RPS3P23396 MYC-208ENST00000641036 567 ntBASIC18.49■□□□□ 0.557e-16■□□□□ 10.8
RPS3P23396 EIF4G2-223ENST00000532152 587 ntTSL 22.65□□□□□ -1.993e-7■□□□□ 10.8
RPS3P23396 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.013e-7■□□□□ 10.8
RPS3P23396 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.293e-7■□□□□ 10.8
RPS3P23396 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)12.53□□□□□ -0.43e-7■□□□□ 10.8
RPS3P23396 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC11.88□□□□□ -0.513e-7■□□□□ 10.8
RPS3P23396 SRSF5-212ENST00000556184 2443 ntTSL 1 (best)10.2□□□□□ -0.783e-7■□□□□ 10.8
RPS3P23396 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.913e-7■□□□□ 10.8
RPS3P23396 SRSF5-211ENST00000555547 2057 ntTSL 58.69□□□□□ -1.023e-7■□□□□ 10.8
RPS3P23396 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)8.08□□□□□ -1.123e-7■□□□□ 10.8
RPS3P23396 NUSAP1-204ENST00000557840 416 ntTSL 310.67□□□□□ -0.71e-6■□□□□ 10.8
RPS3P23396 DPP4-211ENST00000628861 433 ntTSL 5 BASIC11.31□□□□□ -0.62e-6■□□□□ 10.8
RPS3P23396 DPP4-202ENST00000413651 578 ntTSL 411.31□□□□□ -0.62e-6■□□□□ 10.8
RPS3P23396 DPP4-210ENST00000497461 781 ntTSL 1 (best)9.82□□□□□ -0.842e-6■□□□□ 10.8
RPS3P23396 DPP4-205ENST00000461836 672 ntTSL 1 (best)-0.16□□□□□ -2.442e-6■□□□□ 10.8
RPS3P23396 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC10.24□□□□□ -0.779e-11■□□□□ 10.8
RPS3P23396 ACSL3-210ENST00000540115 624 ntTSL 39.68□□□□□ -0.862e-10■□□□□ 10.8
RPS3P23396 EIF4G2-218ENST00000531416 1969 ntTSL 215.54■□□□□ 0.082e-7■□□□□ 10.8
RPS3P23396 EIF4G2-211ENST00000527526 555 ntTSL 412.53□□□□□ -0.42e-7■□□□□ 10.8
RPS3P23396 EIF4G2-220ENST00000531647 579 ntTSL 412.53□□□□□ -0.42e-7■□□□□ 10.8
RPS3P23396 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)11□□□□□ -0.652e-7■□□□□ 10.8
RPS3P23396 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.922e-7■□□□□ 10.8
RPS3P23396 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)9.1□□□□□ -0.952e-7■□□□□ 10.8
RPS3P23396 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.182e-7■□□□□ 10.8
RPS3P23396 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.262e-7■□□□□ 10.8
RPS3P23396 SLC39A14-211ENST00000522881 560 ntTSL 511.8□□□□□ -0.523e-18■□□□□ 10.8
RPS3P23396 AARS-204ENST00000566969 610 ntTSL 29.71□□□□□ -0.861e-8■□□□□ 10.7
RPS3P23396 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.02■□□□□ 0.631e-8■□□□□ 10.7
RPS3P23396 TSC22D4-205ENST00000493217 2060 ntTSL 1 (best)18.64■□□□□ 0.571e-8■□□□□ 10.7
RPS3P23396 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21e-8■□□□□ 10.7
RPS3P23396 TROVE2-209ENST00000460715 1474 ntTSL 315.04■□□□□ -01e-8■□□□□ 10.7
RPS3P23396 TROVE2-210ENST00000469214 592 ntTSL 314.82□□□□□ -0.041e-8■□□□□ 10.7
RPS3P23396 TROVE2-207ENST00000415442 377 ntTSL 314.78□□□□□ -0.041e-8■□□□□ 10.7
RPS3P23396 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.361e-8■□□□□ 10.7
RPS3P23396 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.7□□□□□ -0.381e-8■□□□□ 10.7
RPS3P23396 TROVE2-211ENST00000506303 613 ntTSL 310.36□□□□□ -0.751e-8■□□□□ 10.7
RPS3P23396 FKBP4-205ENST00000543037 727 ntTSL 26.74□□□□□ -1.331e-8■□□□□ 10.7
RPS3P23396 HNRNPC-220ENST00000555585 682 ntTSL 29.56□□□□□ -0.886e-12■□□□□ 10.7
RPS3P23396 HNRNPC-210ENST00000554417 691 ntTSL 27.22□□□□□ -1.256e-12■□□□□ 10.7
RPS3P23396 HNRNPC-217ENST00000555176 531 ntTSL 53.26□□□□□ -1.894e-10■□□□□ 10.7
RPS3P23396 FDXR-208ENST00000578473 2482 ntTSL 1 (best)20.59■□□□□ 0.893e-6■□□□□ 10.7
RPS3P23396 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.38■□□□□ 0.853e-6■□□□□ 10.7
RPS3P23396 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.16■□□□□ 0.823e-6■□□□□ 10.7
RPS3P23396 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.813e-6■□□□□ 10.7
RPS3P23396 FDXR-206ENST00000577509 1912 ntTSL 220■□□□□ 0.793e-6■□□□□ 10.7
RPS3P23396 FDXR-218ENST00000583881 1561 ntTSL 219.96■□□□□ 0.793e-6■□□□□ 10.7
RPS3P23396 FDXR-209ENST00000579482 2157 ntTSL 218.99■□□□□ 0.633e-6■□□□□ 10.7
RPS3P23396 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.5■□□□□ 0.553e-6■□□□□ 10.7
RPS3P23396 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.543e-6■□□□□ 10.7
RPS3P23396 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.94■□□□□ 0.463e-6■□□□□ 10.7
RPS3P23396 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.89■□□□□ 0.453e-6■□□□□ 10.7
RPS3P23396 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.7■□□□□ 0.423e-6■□□□□ 10.7
RPS3P23396 EIF4G2-227ENST00000533485 806 ntTSL 27.32□□□□□ -1.241e-21■□□□□ 10.7
RPS3P23396 CEACAM1-210ENST00000471298 417 ntTSL 52.06□□□□□ -2.088e-7■□□□□ 10.7
RPS3P23396 ZNF207-201ENST00000321233 2283 ntTSL 1 (best) BASIC10.47□□□□□ -0.732e-8■□□□□ 10.7
RPS3P23396 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.012e-8■□□□□ 10.7
RPS3P23396 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.032e-8■□□□□ 10.7
RPS3P23396 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.91□□□□□ -1.142e-8■□□□□ 10.7
RPS3P23396 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.632e-8■□□□□ 10.7
RPS3P23396 ERBB2-214ENST00000583038 4930 ntTSL 215.72■□□□□ 0.114e-7■□□□□ 10.7
RPS3P23396 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.07□□□□□ -0.321e-7■□□□□ 10.7
RPS3P23396 SRP14-207ENST00000559475 463 ntTSL 29.09□□□□□ -0.951e-7■□□□□ 10.7
RPS3P23396 SCAMP4-211ENST00000588907 547 ntTSL 416.79■□□□□ 0.282e-7■□□□□ 10.7
RPS3P23396 SCAMP4-203ENST00000411971 783 ntTSL 515.79■□□□□ 0.122e-7■□□□□ 10.7
RPS3P23396 SCAMP4-205ENST00000452128 718 ntTSL 215.7■□□□□ 0.12e-7■□□□□ 10.7
RPS3P23396 SCAMP4-212ENST00000590266 570 ntTSL 513.65□□□□□ -0.222e-7■□□□□ 10.7
RPS3P23396 SCAMP4-206ENST00000460767 569 ntTSL 413.26□□□□□ -0.292e-7■□□□□ 10.7
RPS3P23396 SCAMP4-208ENST00000489554 573 ntTSL 310.3□□□□□ -0.762e-7■□□□□ 10.7
RPS3P23396 SLC38A5-202ENST00000416711 708 ntTSL 512.64□□□□□ -0.397e-10■□□□□ 10.7
RPS3P23396 SLC38A5-201ENST00000413668 741 ntTSL 212.1□□□□□ -0.477e-10■□□□□ 10.7
RPS3P23396 PLOD3-206ENST00000454310 1098 ntAPPRIS ALT2 TSL 515.93■□□□□ 0.143e-6■□□□□ 10.7
RPS3P23396 CAPRIN1-213ENST00000533562 591 ntTSL 211.94□□□□□ -0.51e-8■□□□□ 10.7
RPS3P23396 DDX39B-217ENST00000474961 974 ntTSL 29.39□□□□□ -0.919e-7■□□□□ 10.7
RPS3P23396 DDX39B-216ENST00000462421 618 ntTSL 38.69□□□□□ -1.029e-7■□□□□ 10.7
RPS3P23396 DDX39B-221ENST00000484566 857 ntTSL 57.93□□□□□ -1.149e-7■□□□□ 10.7
RPS3P23396 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.292e-6■□□□□ 10.7
RPS3P23396 SEPT5-207ENST00000431044 3173 ntTSL 1 (best)15.75■□□□□ 0.112e-6■□□□□ 10.7
RPS3P23396 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.53□□□□□ -0.082e-7■□□□□ 10.7
RPS3P23396 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.582e-7■□□□□ 10.7
RPS3P23396 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.212e-7■□□□□ 10.7
RPS3P23396 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.372e-7■□□□□ 10.7
RPS3P23396 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.272e-7■□□□□ 10.7
RPS3P23396 SLC9A3R1-204ENST00000581356 519 ntTSL 312.29□□□□□ -0.446e-10■□□□□ 10.7
RPS3P23396 GTF3C1-205ENST00000564747 2798 nt15.13■□□□□ 0.013e-8■□□□□ 10.7
RPS3P23396 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)28.59■■■□□ 2.174e-8■□□□□ 10.7
RPS3P23396 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.254e-8■□□□□ 10.7
RPS3P23396 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)9.8□□□□□ -0.841e-6■□□□□ 10.7
RPS3P23396 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)9.49□□□□□ -0.891e-6■□□□□ 10.7
RPS3P23396 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)9.49□□□□□ -0.891e-6■□□□□ 10.7
RPS3P23396 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)9.42□□□□□ -0.91e-6■□□□□ 10.7
RPS3P23396 ITGA2-202ENST00000503810 3782 ntTSL 58.83□□□□□ -11e-6■□□□□ 10.7
RPS3P23396 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.291e-6■□□□□ 10.7
RPS3P23396 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.53□□□□□ -1.522e-7■□□□□ 10.7
RPS3P23396 EEF2-205ENST00000598436 549 ntTSL 212.56□□□□□ -0.41e-39■□□□□ 10.7
RPS3P23396 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.615e-10■□□□□ 10.7
RPS3P23396 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.87■□□□□ 0.135e-10■□□□□ 10.7
Retrieved 100 of 24,271 protein–RNA pairs in 339.8 ms