RNA–Protein interactions for RNA: ENST00000400968.6

TROVE2-206, Transcript of TROVE domain family member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROVE2, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-206ENST00000400968 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
TROVE2-206ENST00000400968 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
TROVE2-206ENST00000400968 ZCCHC6Q5VYS8 1495 aaKnown RBP22.71■■□□□ 1.23
TROVE2-206ENST00000400968 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
TROVE2-206ENST00000400968 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
TROVE2-206ENST00000400968 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
TROVE2-206ENST00000400968 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.14
TROVE2-206ENST00000400968 DCAF1Q9Y4B6 1507 aa21.99■■□□□ 1.11
TROVE2-206ENST00000400968 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
TROVE2-206ENST00000400968 HRCP23327 699 aa21.86■■□□□ 1.09
TROVE2-206ENST00000400968 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
TROVE2-206ENST00000400968 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
TROVE2-206ENST00000400968 ABCC9O60706 1549 aa21.46■■□□□ 1.03
TROVE2-206ENST00000400968 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
TROVE2-206ENST00000400968 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
TROVE2-206ENST00000400968 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
TROVE2-206ENST00000400968 TRIM26Q12899 539 aaPredicted RBP21.2■□□□□ 0.98
TROVE2-206ENST00000400968 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
TROVE2-206ENST00000400968 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
TROVE2-206ENST00000400968 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
TROVE2-206ENST00000400968 NACADO15069 1562 aa20.86■□□□□ 0.93
TROVE2-206ENST00000400968 FAM9AQ8IZU1 332 aaPredicted RBP20.83■□□□□ 0.92
TROVE2-206ENST00000400968 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
TROVE2-206ENST00000400968 ZEB1P37275 1124 aaPredicted RBP20.82■□□□□ 0.92
TROVE2-206ENST00000400968 WIZO95785 1651 aa20.69■□□□□ 0.9
TROVE2-206ENST00000400968 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
TROVE2-206ENST00000400968 EIF4G1Q04637 1599 aaKnown RBP20.6■□□□□ 0.89
TROVE2-206ENST00000400968 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
TROVE2-206ENST00000400968 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
TROVE2-206ENST00000400968 CCDC88BA6NC98 1476 aa20.32■□□□□ 0.84
TROVE2-206ENST00000400968 SMARCA4P51532 1647 aa20.32■□□□□ 0.84
TROVE2-206ENST00000400968 ABCC8Q09428 1581 aa20.31■□□□□ 0.84
TROVE2-206ENST00000400968 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
TROVE2-206ENST00000400968 WRNQ14191 1432 aaPredicted RBP eCLIP20.3■□□□□ 0.844e-8■■■■■ 27.9
TROVE2-206ENST00000400968 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
TROVE2-206ENST00000400968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
TROVE2-206ENST00000400968 CCER1Q8TC90 406 aaPredicted RBP20.21■□□□□ 0.83
TROVE2-206ENST00000400968 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
TROVE2-206ENST00000400968 SOGA1O94964 1423 aa20.2■□□□□ 0.82
TROVE2-206ENST00000400968 TNIKQ9UKE5 1360 aa20.17■□□□□ 0.82
TROVE2-206ENST00000400968 UNC13AQ9UPW8 1703 aa20.15■□□□□ 0.82
TROVE2-206ENST00000400968 EEA1Q15075 1411 aa20.13■□□□□ 0.81
TROVE2-206ENST00000400968 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
TROVE2-206ENST00000400968 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
TROVE2-206ENST00000400968 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
TROVE2-206ENST00000400968 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
TROVE2-206ENST00000400968 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
TROVE2-206ENST00000400968 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
TROVE2-206ENST00000400968 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
TROVE2-206ENST00000400968 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
TROVE2-206ENST00000400968 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
TROVE2-206ENST00000400968 BICRAQ9NZM4 1560 aa19.95■□□□□ 0.78
TROVE2-206ENST00000400968 NEUROD1Q13562 356 aa19.95■□□□□ 0.78
TROVE2-206ENST00000400968 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
TROVE2-206ENST00000400968 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
TROVE2-206ENST00000400968 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
TROVE2-206ENST00000400968 KIF21BO75037 1637 aa19.85■□□□□ 0.77
TROVE2-206ENST00000400968 ZNF316A6NFI3 1004 aaPredicted RBP19.79■□□□□ 0.76
TROVE2-206ENST00000400968 CENPBP07199 599 aaPredicted RBP19.79■□□□□ 0.76
TROVE2-206ENST00000400968 CLIP1P30622 1438 aa19.77■□□□□ 0.76
TROVE2-206ENST00000400968 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
TROVE2-206ENST00000400968 GTF3C3Q9Y5Q9 886 aa19.74■□□□□ 0.75
TROVE2-206ENST00000400968 VPS8Q8N3P4 1428 aa19.73■□□□□ 0.75
TROVE2-206ENST00000400968 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
TROVE2-206ENST00000400968 RAPGEF2Q9Y4G8 1499 aa19.69■□□□□ 0.74
TROVE2-206ENST00000400968 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
TROVE2-206ENST00000400968 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
TROVE2-206ENST00000400968 MIER1Q8N108 512 aa19.54■□□□□ 0.72
TROVE2-206ENST00000400968 APLP2Q06481 763 aa19.54■□□□□ 0.72
TROVE2-206ENST00000400968 BIVM-ERCC5R4GMW8 1640 aa19.52■□□□□ 0.72
TROVE2-206ENST00000400968 PRXQ9BXM0 1461 aa19.51■□□□□ 0.71
TROVE2-206ENST00000400968 ERICH3Q5RHP9 1530 aa19.49■□□□□ 0.71
TROVE2-206ENST00000400968 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
TROVE2-206ENST00000400968 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
TROVE2-206ENST00000400968 YTHDC1Q96MU7 727 aaKnown RBP19.46■□□□□ 0.71
TROVE2-206ENST00000400968 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
TROVE2-206ENST00000400968 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
TROVE2-206ENST00000400968 CUX1P39880 1505 aa19.37■□□□□ 0.69
TROVE2-206ENST00000400968 KANK4Q5T7N3 995 aaPredicted RBP19.37■□□□□ 0.69
TROVE2-206ENST00000400968 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
TROVE2-206ENST00000400968 HMGXB3Q12766 1538 aa19.34■□□□□ 0.69
TROVE2-206ENST00000400968 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
TROVE2-206ENST00000400968 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
TROVE2-206ENST00000400968 CUX2O14529 1486 aa19.28■□□□□ 0.68
TROVE2-206ENST00000400968 CFTRP13569 1480 aa19.25■□□□□ 0.67
TROVE2-206ENST00000400968 ARHGAP35Q9NRY4 1499 aa19.25■□□□□ 0.67
TROVE2-206ENST00000400968 CCNB3Q8WWL7 1395 aa19.2■□□□□ 0.66
TROVE2-206ENST00000400968 IGF1RP08069 1367 aa19.12■□□□□ 0.65
TROVE2-206ENST00000400968 MYT1Q01538 1121 aa19.1■□□□□ 0.65
TROVE2-206ENST00000400968 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
TROVE2-206ENST00000400968 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
TROVE2-206ENST00000400968 MAPKBP1O60336 1514 aa19.06■□□□□ 0.64
TROVE2-206ENST00000400968 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
TROVE2-206ENST00000400968 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
TROVE2-206ENST00000400968 ITGAEP38570 1179 aa19.03■□□□□ 0.64
TROVE2-206ENST00000400968 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
TROVE2-206ENST00000400968 CARMIL1Q5VZK9 1371 aa19■□□□□ 0.63
TROVE2-206ENST00000400968 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
TROVE2-206ENST00000400968 PHLDB1Q86UU1 1377 aa18.97■□□□□ 0.63
TROVE2-206ENST00000400968 SETD5Q9C0A6 1442 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms