RNA–Protein interactions for RNA: ENST00000557840.5

NUSAP1-204, Transcript of nucleolar and spindle associated protein 1, humanhuman

TSL 3

Gene NUSAP1, Length 416 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-204ENST00000557840 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
NUSAP1-204ENST00000557840 ABCC9O60706 1549 aa25.6■■□□□ 1.69
NUSAP1-204ENST00000557840 CCDC180Q9P1Z9 1646 aa25.34■■□□□ 1.65
NUSAP1-204ENST00000557840 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
NUSAP1-204ENST00000557840 DCAF8L2P0C7V8 631 aa24.09■■□□□ 1.45
NUSAP1-204ENST00000557840 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
NUSAP1-204ENST00000557840 NACADO15069 1562 aa23.99■■□□□ 1.43
NUSAP1-204ENST00000557840 PABPN1Q86U42 306 aaKnown RBP eCLIP23.83■■□□□ 1.41
NUSAP1-204ENST00000557840 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
NUSAP1-204ENST00000557840 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
NUSAP1-204ENST00000557840 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
NUSAP1-204ENST00000557840 ZCCHC6Q5VYS8 1495 aaKnown RBP23.35■■□□□ 1.33
NUSAP1-204ENST00000557840 DCAF1Q9Y4B6 1507 aa23.21■■□□□ 1.31
NUSAP1-204ENST00000557840 SCRIBQ14160 1630 aa23.21■■□□□ 1.31
NUSAP1-204ENST00000557840 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
NUSAP1-204ENST00000557840 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
NUSAP1-204ENST00000557840 CECR2Q9BXF3 1484 aa23.03■■□□□ 1.28
NUSAP1-204ENST00000557840 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
NUSAP1-204ENST00000557840 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
NUSAP1-204ENST00000557840 ERCC6Q03468 1493 aa22.14■■□□□ 1.13
NUSAP1-204ENST00000557840 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
NUSAP1-204ENST00000557840 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
NUSAP1-204ENST00000557840 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
NUSAP1-204ENST00000557840 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
NUSAP1-204ENST00000557840 CUX2O14529 1486 aa22.02■■□□□ 1.12
NUSAP1-204ENST00000557840 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
NUSAP1-204ENST00000557840 NESP48681 1621 aa21.92■■□□□ 1.1
NUSAP1-204ENST00000557840 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
NUSAP1-204ENST00000557840 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
NUSAP1-204ENST00000557840 MROH2BQ7Z745 1585 aa21.76■■□□□ 1.07
NUSAP1-204ENST00000557840 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
NUSAP1-204ENST00000557840 LAMC3Q9Y6N6 1575 aa21.69■■□□□ 1.06
NUSAP1-204ENST00000557840 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
NUSAP1-204ENST00000557840 KIF21AQ7Z4S6 1674 aa21.63■■□□□ 1.05
NUSAP1-204ENST00000557840 PDS5BQ9NTI5 1447 aa21.6■■□□□ 1.05
NUSAP1-204ENST00000557840 WIZO95785 1651 aa21.53■■□□□ 1.04
NUSAP1-204ENST00000557840 CADPSQ9ULU8 1353 aa21.5■■□□□ 1.03
NUSAP1-204ENST00000557840 MRC2Q9UBG0 1479 aa21.42■■□□□ 1.02
NUSAP1-204ENST00000557840 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
NUSAP1-204ENST00000557840 WDR62O43379 1518 aa21.34■■□□□ 1.01
NUSAP1-204ENST00000557840 TRIM41Q8WV44 630 aa21.31■■□□□ 1
NUSAP1-204ENST00000557840 FANCD2Q9BXW9 1451 aa21.3■■□□□ 1
NUSAP1-204ENST00000557840 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
NUSAP1-204ENST00000557840 CFTRP13569 1480 aa21.2■□□□□ 0.98
NUSAP1-204ENST00000557840 TOP2AP11388 1531 aaKnown RBP21.2■□□□□ 0.98
NUSAP1-204ENST00000557840 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
NUSAP1-204ENST00000557840 OSCARQ8IYS5 282 aa21.05■□□□□ 0.96
NUSAP1-204ENST00000557840 PRDM2Q13029 1718 aa21■□□□□ 0.95
NUSAP1-204ENST00000557840 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
NUSAP1-204ENST00000557840 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.94
NUSAP1-204ENST00000557840 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
NUSAP1-204ENST00000557840 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
NUSAP1-204ENST00000557840 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
NUSAP1-204ENST00000557840 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
NUSAP1-204ENST00000557840 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
NUSAP1-204ENST00000557840 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
NUSAP1-204ENST00000557840 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
NUSAP1-204ENST00000557840 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
NUSAP1-204ENST00000557840 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
NUSAP1-204ENST00000557840 FBLN2P98095 1184 aa20.7■□□□□ 0.9
NUSAP1-204ENST00000557840 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.91e-7■■■■■ 39.4
NUSAP1-204ENST00000557840 CHD1O14646 1710 aa20.65■□□□□ 0.9
NUSAP1-204ENST00000557840 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
NUSAP1-204ENST00000557840 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
NUSAP1-204ENST00000557840 CYB5RLQ6IPT4 315 aa20.63■□□□□ 0.89
NUSAP1-204ENST00000557840 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
NUSAP1-204ENST00000557840 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
NUSAP1-204ENST00000557840 SOGA1O94964 1423 aa20.57■□□□□ 0.88
NUSAP1-204ENST00000557840 FGD5Q6ZNL6 1462 aa20.51■□□□□ 0.87
NUSAP1-204ENST00000557840 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
NUSAP1-204ENST00000557840 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
NUSAP1-204ENST00000557840 ARAP1Q96P48 1450 aa20.48■□□□□ 0.87
NUSAP1-204ENST00000557840 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
NUSAP1-204ENST00000557840 CUX1P39880 1505 aa20.46■□□□□ 0.87
NUSAP1-204ENST00000557840 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
NUSAP1-204ENST00000557840 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
NUSAP1-204ENST00000557840 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
NUSAP1-204ENST00000557840 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
NUSAP1-204ENST00000557840 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
NUSAP1-204ENST00000557840 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
NUSAP1-204ENST00000557840 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
NUSAP1-204ENST00000557840 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
NUSAP1-204ENST00000557840 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
NUSAP1-204ENST00000557840 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
NUSAP1-204ENST00000557840 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
NUSAP1-204ENST00000557840 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
NUSAP1-204ENST00000557840 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
NUSAP1-204ENST00000557840 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
NUSAP1-204ENST00000557840 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.8
NUSAP1-204ENST00000557840 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
NUSAP1-204ENST00000557840 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
NUSAP1-204ENST00000557840 CEP170Q5SW79 1584 aa20.05■□□□□ 0.8
NUSAP1-204ENST00000557840 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
NUSAP1-204ENST00000557840 NUP160Q12769 1436 aa20.02■□□□□ 0.79
NUSAP1-204ENST00000557840 AEBP2Q6ZN18 517 aaPredicted RBP20.01■□□□□ 0.79
NUSAP1-204ENST00000557840 ERICH3Q5RHP9 1530 aa19.97■□□□□ 0.79
NUSAP1-204ENST00000557840 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
NUSAP1-204ENST00000557840 PRG4Q92954 1404 aaPredicted RBP19.91■□□□□ 0.78
NUSAP1-204ENST00000557840 JPH4Q96JJ6 628 aa19.88■□□□□ 0.77
NUSAP1-204ENST00000557840 RUSC2Q8N2Y8 1516 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms